Jatropha Genome Database

JcCB0077821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0077821.10 + phase: 0 
         (362 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008666 3-methyl-2-oxobutanoate hydroxymethyltransferase, ...   610   e-175
39910.m000014 3-methyl-2-oxobutanoate hydroxymethyltransferase, ...   198   4e-51

>30174.m008666 3-methyl-2-oxobutanoate hydroxymethyltransferase,
           putative
          Length = 362

 Score =  610 bits (1574), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 299/362 (82%), Positives = 317/362 (87%)

Query: 1   MALFAKLYRSSSVIKAHYLHHCLRSMSNVPENTVYGGPKSQNPNERVTLTQLKQKHKKGE 60
           M+L  KL +SSS+   +Y  HCLR MSN+PENTVYGGPK Q  N+RVTL+ LKQKHKKGE
Sbjct: 1   MSLLTKLSKSSSITHPNYFLHCLRYMSNIPENTVYGGPKPQCSNQRVTLSHLKQKHKKGE 60

Query: 61  PITVVTAYDYPSAVHLDQAGIDICLVGDSAAMVVHGHDTTLPISLEEMLVHCRAVARGAK 120
           PITVVTAYDY SAVHLD AGIDICLVGDSAAMVVHGHDTTLPISL+EMLVHCR+VARGA 
Sbjct: 61  PITVVTAYDYSSAVHLDTAGIDICLVGDSAAMVVHGHDTTLPISLDEMLVHCRSVARGAN 120

Query: 121 RPLLVGDLPFGTYESSTKQAVDTAVRVLKEGGMDAIKLEGGSPSRITAAKAIVEAGIAVM 180
           RPLLVGDLPFGTYESST QAVDTAVRVLKEGGMDAIKLEGGS SRITAAKAIVEAGIAVM
Sbjct: 121 RPLLVGDLPFGTYESSTMQAVDTAVRVLKEGGMDAIKLEGGSSSRITAAKAIVEAGIAVM 180

Query: 181 GHVGLTPQAISVLGGFRPQGKNISSAVKVVETSLALQEVGCFSVVLECXXXXXXXXXTSA 240
           GHVGLTPQAISVLGGFRPQGKNISSAVKVVET+L LQE GCFSVVLEC         TSA
Sbjct: 181 GHVGLTPQAISVLGGFRPQGKNISSAVKVVETALQLQEAGCFSVVLECVPAPVAAAATSA 240

Query: 241 LRIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYAQVGDVINKALLEYKE 300
           LRIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQ+A+VGDVINKALLEYKE
Sbjct: 241 LRIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQFARVGDVINKALLEYKE 300

Query: 301 EVTNSSFPGPAHSPYKINAADINGLLNELQKLGLNKXXXXXXXXXEKIKTSESLAGSGPA 360
           EV N SFPGPAHSPYKI+AAD+NG L+ELQKLGL+K         EKI+T+ES  GS  A
Sbjct: 301 EVINGSFPGPAHSPYKISAADMNGFLSELQKLGLDKAVSLAAAAAEKIQTAESFEGSTSA 360

Query: 361 ND 362
           ND
Sbjct: 361 ND 362


>39910.m000014 3-methyl-2-oxobutanoate hydroxymethyltransferase,
           putative
          Length = 222

 Score =  198 bits (503), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 95/215 (44%), Positives = 150/215 (69%), Gaps = 1/215 (0%)

Query: 45  ERVTLTQLKQKHKKGEPITVVTAYDYPSAVHLDQAGIDICLVGDSAAMVVHGHDTTLPIS 104
           +R+T   +++   +GE IT +TAYDY  A  +D AG+++ LVGDSA+ V+ GH+TTLPI+
Sbjct: 9   KRITTHVIQEMKNRGEKITCLTAYDYSMAGIVDAAGVELILVGDSASNVMAGHETTLPIT 68

Query: 105 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTKQAVDTAVRVLKEGGMDAIKLEGGSPS 164
           +++M+ H  +V R  KR L+V DLPFG+Y+ ++++A+++A+R++KE G  A+KLEGG   
Sbjct: 69  IDQMIYHASSVVRAVKRALVVVDLPFGSYQGNSREALNSAIRIMKESGAHAVKLEGGLEI 128

Query: 165 RITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNISSAVKVVETSLALQEVGCFSV 224
           + +  + I+ AG+ VMGH+GLTPQ+I   G +  + K  + A K+++ +  L+EVGCFSV
Sbjct: 129 KDSVTR-ILSAGVPVMGHLGLTPQSIYKFGTYTVRAKQEAEAQKLLDDAKMLEEVGCFSV 187

Query: 225 VLECXXXXXXXXXTSALRIPTIGIGAGPFCSGQVL 259
           VLE          + +++IPT+GIGAGP   GQ+L
Sbjct: 188 VLEKIPSKLTKQVSESIQIPTVGIGAGPHADGQIL 222