Jatropha Genome Database

JcCB0075691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075691.10 + phase: 0 /pseudo
         (131 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013741 voltage-dependent anion-selective channel, putative     146   2e-36
29661.m000917 voltage-dependent anion-selective channel, putative     141   9e-35
29822.m003473 voltage-dependent anion-selective channel, putative     111   9e-26
29736.m002034 voltage-dependent anion-selective channel, putative     107   2e-24

>30170.m013741 voltage-dependent anion-selective channel, putative
          Length = 275

 Score =  146 bits (369), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/105 (72%), Positives = 88/105 (83%), Gaps = 1/105 (0%)

Query: 3   SKGPGLFSDFGKKARDVLFKDYSTDQKFAISSCAESGVAITSNVVEKGGLSIGDVSTQHK 62
           SKGPGLFSDFGKKA D+L KDYSTD K A+SS   SG  ITS++  KGGLS GDV+TQ K
Sbjct: 2   SKGPGLFSDFGKKAGDLLNKDYSTDHKIAVSSSFASG-GITSSLYTKGGLSSGDVATQLK 60

Query: 63  FKNGSLDVKLDTQSNILTTLRLTDFPSSTKVIASLKLPDYNSGKV 107
           FKNGSLD+K++T+SNIL TL  T+ PSSTKVIAS+KLPDYNSGK+
Sbjct: 61  FKNGSLDIKINTESNILATLTATELPSSTKVIASVKLPDYNSGKL 105


>29661.m000917 voltage-dependent anion-selective channel, putative
          Length = 276

 Score =  141 bits (355), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 69/105 (65%), Positives = 88/105 (83%)

Query: 3   SKGPGLFSDFGKKARDVLFKDYSTDQKFAISSCAESGVAITSNVVEKGGLSIGDVSTQHK 62
           SKGPGLFSD GKKA+D+L KDYS+DQKFA+S+ +++GVA+TS+ ++KGGLS GDV+  +K
Sbjct: 2   SKGPGLFSDIGKKAKDLLIKDYSSDQKFAVSTYSDAGVALTSSALKKGGLSTGDVAALYK 61

Query: 63  FKNGSLDVKLDTQSNILTTLRLTDFPSSTKVIASLKLPDYNSGKV 107
           +KN  LDVK+DT+SNI TTL  T+   STK IAS KLPDYNSGK+
Sbjct: 62  YKNTLLDVKVDTESNISTTLTFTEILPSTKAIASFKLPDYNSGKL 106


>29822.m003473 voltage-dependent anion-selective channel, putative
          Length = 274

 Score =  111 bits (277), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 75/104 (72%)

Query: 4   KGPGLFSDFGKKARDVLFKDYSTDQKFAISSCAESGVAITSNVVEKGGLSIGDVSTQHKF 63
           KGPGL+++ GKKARD+L+KDY TDQKF I++ + +GVAITS  V+KG L + DV+TQ K 
Sbjct: 3   KGPGLYTEIGKKARDLLYKDYQTDQKFTITTYSPTGVAITSTGVKKGELFLADVNTQLKQ 62

Query: 64  KNGSLDVKLDTQSNILTTLRLTDFPSSTKVIASLKLPDYNSGKV 107
           KN + D+K+DT SN+ TT  + +     K I S KLPD  SGK+
Sbjct: 63  KNVTTDIKVDTDSNLFTTTTVDELAPGLKTILSCKLPDQRSGKL 106


>29736.m002034 voltage-dependent anion-selective channel, putative
          Length = 276

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 74/104 (71%)

Query: 4   KGPGLFSDFGKKARDVLFKDYSTDQKFAISSCAESGVAITSNVVEKGGLSIGDVSTQHKF 63
           KGPGL++D GKKARD+L+KDY  D KF +++   +GVAITS  ++KG + +GD+++Q K 
Sbjct: 3   KGPGLYTDIGKKARDLLYKDYQGDHKFTVTTYTSTGVAITSTGIKKGEIYLGDITSQLKN 62

Query: 64  KNGSLDVKLDTQSNILTTLRLTDFPSSTKVIASLKLPDYNSGKV 107
           KN + D+K+DT SN+ TT+ + +     K I S K+PD  SGKV
Sbjct: 63  KNITTDIKVDTSSNVSTTITVDEPAPGLKTIFSFKIPDQRSGKV 106