Jatropha Genome Database

JcCB0075571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075571.10 - phase: 0 /partial
         (700 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30146.m003441 hypothetical protein                                    722   0.0  
29794.m003359 conserved hypothetical protein                          332   5e-91

>30146.m003441 hypothetical protein
          Length = 783

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/718 (56%), Positives = 484/718 (67%), Gaps = 20/718 (2%)

Query: 1   MRGPKDEEKIMSPIFPRLHVNDTEKGGPKAPPRNKMALYEQLSIPSQRFXXXXXXXXXXX 60
           MRG KDE+K++SP+FPRLHVNDTEKGGP+APPRNKMALYEQL IPS++            
Sbjct: 2   MRGTKDEDKMISPMFPRLHVNDTEKGGPRAPPRNKMALYEQLGIPSRKVSSGSASMLPLP 61

Query: 61  XXXXXKLIPSM--------ALSQGGSFERSTF---CNXXXXXXXXXXXXXXXGGVKLSTK 109
                  +P M        + SQ    ERS F   CN                G+K S K
Sbjct: 62  PNNGSTFVPKMLPSHVTSDSCSQVSGNERSVFTPFCNSPAPSHSEKSFSYSSDGIKRSNK 121

Query: 110 MASPEWKSMNSTDDRNLKTTQPLSFIAESNSFQSHNFANFKNVSCNKFGDEKDFGVPTSS 169
           M + EWKSMN T+ ++LKTTQ L     SNSFQ HNF++ KN S  K G E DF V  S+
Sbjct: 122 MENQEWKSMNCTNGQSLKTTQSL-LSNASNSFQLHNFSHLKNFSWKKIGYENDFRVSGSA 180

Query: 170 QSGAVLLC-SSKHNKEQDSQPCWNLSFSMQFQNGSEKRRKGTGTVNQKARESMRKQAEEN 228
           QSGAV    SS+HNK++++QPCWNLSFSM FQN SEK++KG G ++ KA ES R Q EE 
Sbjct: 181 QSGAVPHSNSSQHNKDRENQPCWNLSFSMHFQNVSEKQKKGPGIIDLKATESTRNQTEEQ 240

Query: 229 AKISHAFLDPVERPASVPSVQDKTSVDASSSPSAKVKRTESLKRAHPLSNQENSSSSGNV 288
            K+S A  D  ER + VPS  DKTS D S SPS KVKR ESLKRAHP S Q++ SSS + 
Sbjct: 241 RKMSEACKDLRERYSPVPSFHDKTSADPSCSPSGKVKRPESLKRAHPSSYQDHRSSSVDF 300

Query: 289 LKGLHGTNSWLNKNFIEMQDRKIVHKDKDLVEFALSMGKENASKMRHESCSWFSLGNYNR 348
           L+ L G+   L++ F+ +QD K VHK+K   E+A+   KENA+K+  + C    L + NR
Sbjct: 301 LRSLKGSKGQLDQEFVTVQD-KAVHKEKSWEEYAIGNDKENAAKVTSKLCYRLPLRDDNR 359

Query: 349 SHSDIENVIKTNQDKY-GSLQVGNVQRRDDVSKTSMMDSVSAFGITSDNVIRVIGEGQFW 407
           S + IEN  K ++DK  GSLQVG+V+R +D S+TS++DS+SA  I+ D+V+R+IGE QFW
Sbjct: 360 SCNVIENSRKNHEDKQNGSLQVGDVERHNDGSETSLVDSLSALEISPDDVVRIIGEKQFW 419

Query: 408 EARRAIVKQQREFKIQVFELHRLIKVQMLIAGSPDLLLEDNIYLAKASLEVSPVKKVASE 467
           +ARR IV QQR F +QV ELHRLIKVQ LIAGSP LLL+D  YL KA L+ S  KKV S 
Sbjct: 420 KARRIIVNQQRAFTVQVSELHRLIKVQKLIAGSPALLLKDKFYLGKAFLKASEAKKVPSN 479

Query: 468 NAREQPPLIDKQKDVSQKPYPSAEFADENAVVKLPLPHVNNETSKGLLTQQSNDGSHSEG 527
            A EQPP I K KD SQKP+ S EFA+ENAV KL L  VNNE SKGL T QSN GS S G
Sbjct: 480 YAIEQPPPIVKPKDGSQKPHSSTEFAEENAVAKLSLSAVNNEVSKGLHTNQSNYGSDSGG 539

Query: 528 VLLSPIAANTRQSPWCFPPQGNQWLVPVMSHSEGLVYKPYAGPCPPTAGFIAPVYGKCGP 587
            L +P+A N+  SPWCFPP  NQWLVPVMS SEGLVYKPY GPCPPTAGF+A VYG C P
Sbjct: 540 HLPAPVATNSGPSPWCFPPPSNQWLVPVMSPSEGLVYKPYTGPCPPTAGFMAQVYGNCAP 599

Query: 588 MNLPAGGGDFLNAACGV----QQGIGILPMIPPLGQTYFPPHAMPVMSPSISVSAVELVT 643
           ++L    GDF+N A GV    Q GIGILP  PPLGQ YFPP+ MPVM+PSIS      V+
Sbjct: 600 VSLDGEHGDFINGAYGVQASHQNGIGILPSDPPLGQNYFPPYGMPVMTPSISGLLFGQVS 659

Query: 644 PFIAPPSKDNQSSAGDIKFAFPHQSSCNMLSQMSRVI-LCGGKFQASKESEVQESTAS 700
           PF  P SK NQ S GD+ F FP QSSC++ S MSRVI  C   FQ SKES+VQ STAS
Sbjct: 660 PFNGPQSKGNQLSLGDMNFTFPQQSSCHISSSMSRVISCCAENFQPSKESKVQGSTAS 717


>29794.m003359 conserved hypothetical protein
          Length = 720

 Score =  332 bits (850), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 258/719 (35%), Positives = 360/719 (50%), Gaps = 100/719 (13%)

Query: 1   MRGPKDEEKIMSPIFPRLHVNDTEKGGPKAPPRNKMALYEQLSIPSQRFXXXXXXXXXXX 60
           M+  KD+EK+M P+FPRLHVNDT+KGGP+APPRNKMALYEQLSIPSQRF           
Sbjct: 5   MKRGKDDEKMMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFNNHGALLHNPS 64

Query: 61  XXXXXKLIPSMALSQGGSFERSTFCNXXXXXXXXXXXXXXXGGVKLSTKMASPEWKSMNS 120
                 L+P+ + SQG  +ER+                       L   +  P   S +S
Sbjct: 65  KAT--NLVPAASSSQGSGYERN-----------------------LHLPLHVP--PSTHS 97

Query: 121 TDDRNLKTTQPLSFIAESNSFQSHNFANFKNVSCNKFGDEKDFGVPTSSQSG-AVLLCSS 179
             D  L + QP       NS    N A+ +     K GDE DF VP    SG    L  +
Sbjct: 98  HLDEKLHSRQPDG----GNS----NAASAQIEQRKKKGDEDDFRVPVFLHSGMGQSLGKT 149

Query: 180 KHNKEQDSQPCWN---LSFSMQFQNGSEKRRKGTGTVNQKARESMRKQAEENAKISHAFL 236
           +   + ++   +    L  S + ++  +K +K   +     R+  R Q++EN +   +  
Sbjct: 150 QSGIDMENSTSFGQNYLGHSTRLRDAGDKDQKNNISRGPNLRQDARNQSKENLEACVS-- 207

Query: 237 DPVERPASVPSVQDKTSVDASSSPSAKVKRTESLKRAHPLSNQENSSSSGNVLKGLHGTN 296
               R  SV S         +SSPS ++           +   E++S S   L     ++
Sbjct: 208 ---SRGHSVRSF--------TSSPSKELM----------IVRPEDASPSQQNLDDPVASS 246

Query: 297 SWLNKNFIEMQDRKIVH--------KDKDLVEFALSMGKENASKMRHESCSWFSLGNYNR 348
           S L +N + +Q               D+ + E    + K N  +   +S S   L + N 
Sbjct: 247 SSLCENDVCLQQEASAALLQQNDSGHDEGVPELTRELEKGNGPQPMSDSHSTEDLNSPNE 306

Query: 349 SHSDIENVIKTNQDKYGSLQVGNVQRRDDVSKTSMMDSVSAFGITSDNVIRVIGEGQFWE 408
              D E+        Y S+Q GN  + DDVS+ SM+DSVSA  ++ D+V+ +IG+  FW+
Sbjct: 307 PEIDSEH---HGDRSYMSVQFGNGDKSDDVSEISMLDSVSALDVSPDDVVGIIGQKHFWK 363

Query: 409 ARRAIVKQQREFKIQVFELHRLIKVQMLIAGSPDLLLEDNIYLAKASLEVSPVKKVASEN 468
           ARRAIV QQR F +QVFELHRLIKVQ LIAGSP LLLE++ YL K S++VSP KK  SEN
Sbjct: 364 ARRAIVSQQRLFAVQVFELHRLIKVQRLIAGSPHLLLEESTYLGKPSMKVSPAKKPPSEN 423

Query: 469 AREQPPLIDKQKDVSQKPYPSAEFADENAVVKLPLPHVNNETSKGLLTQQSNDGSHSEGV 528
               P  + K+K   +K   + E++ ENAV K         +S    +Q SN G ++   
Sbjct: 424 VVTPPVHVSKRKYDPEKLNHNMEYSAENAVGKF--------SSVKNGSQPSNCGPYTGNP 475

Query: 529 LLSPIAANTRQSPWCFPPQ-GNQWLVPVMSHSEGLVYKPYAGPCPPTAGFIAPVYGKCGP 587
              P+AA+++ +PWCF    G+QWLVPVMS SEGLVYKPYA P     GF+  V G C P
Sbjct: 476 KPVPVAADSKMAPWCFQHSLGHQWLVPVMSPSEGLVYKPYAAP-----GFMGSVCGGCRP 530

Query: 588 MNLPAGGGDFLNAACGV------QQGIGILPMIPPLGQTYFPPHAMPVMSPSISVSAVEL 641
                  G+F++   GV       QG   +P +P LG  YFPP+ MP+MS ++  SAVE 
Sbjct: 531 FGPSPVTGNFMDPTYGVPASHHPHQGTMPMPGVPALGHGYFPPYGMPIMSSTMPGSAVEQ 590

Query: 642 VTPFIAPPSKDNQSSAGDIKFAFPHQSSCNMLSQMSRVILCGGKFQASKESEVQESTAS 700
           +  +     +  Q S G       H S   +  Q S  I    K +ASK++E++ STAS
Sbjct: 591 MNYY----GQAGQLSGGGANIVVQHPS---LQLQKSGSIPRVNKPRASKDTELRGSTAS 642