Jatropha Genome Database

JcCB0075081.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075081.30 - phase: 0 /partial
         (119 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008758 protein binding protein, putative                       193   2e-50

>30128.m008758 protein binding protein, putative
          Length = 276

 Score =  193 bits (490), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 102/119 (85%)

Query: 1   EENVDIIIHHILGVVDSFLKRSNQLHEMMTSETKQEEFKTLVCDAARPFLAARTDRFVNE 60
           EE+V+II+HHILGVVDSF KRS + H+M   ETKQ EF+TLV DAARPFLAARTD FVNE
Sbjct: 158 EEDVEIILHHILGVVDSFQKRSEKTHQMNMPETKQSEFRTLVSDAARPFLAARTDWFVNE 217

Query: 61  LELFLASGFNIEAYDDVYIQQLGWNTPGATGESADVEPSVAIPAVPYLYIFDDDSDETD 119
           LELFLASGFNIEAYD+VY+QQLGWN P  TGE+AD EPS   P +PYLYIFDDDSDET+
Sbjct: 218 LELFLASGFNIEAYDEVYMQQLGWNAPTVTGEAADAEPSEQRPVIPYLYIFDDDSDETE 276