Jatropha Genome Database
- JcCB0075081.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0075081.20 - phase: 0
(461 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008759 amidase, putative 639 0.0
29806.m000976 amidase, putative 368 e-102
29651.m000292 amidase, putative 359 1e-99
29636.m000758 glutamyl-tRNA(gln) amidotransferase subunit A, put... 71 1e-12
55479.m000037 glutamyl-tRNA(gln) amidotransferase subunit A, put... 67 1e-11
30147.m014381 Glutamyl-tRNA(Gln) amidotransferase subunit A, put... 66 3e-11
29804.m001523 glutamyl-tRNA(gln) amidotransferase subunit A, put... 64 1e-10
29756.m000503 amidase, putative 59 5e-09
33669.m000015 amidase, putative 57 2e-08
29756.m000502 amidase, putative 56 4e-08
28930.m000010 glutamyl-tRNA(gln) amidotransferase subunit A, put... 49 4e-06
>30128.m008759 amidase, putative
Length = 500
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/455 (69%), Positives = 352/455 (77%), Gaps = 30/455 (6%)
Query: 1 MARNPDYGAFMEKFVLKPTNLSDELPLNGLTFAVKDIFEVDGYVTGFGNPDWARTHLAAT 60
MA +PDYGAFMEKFVLKP++ SD+LPL+ LTFAVKDIF+VDGYVTGFGNPDWARTH AAT
Sbjct: 73 MAISPDYGAFMEKFVLKPSSSSDQLPLHSLTFAVKDIFDVDGYVTGFGNPDWARTHSAAT 132
Query: 61 STAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXX 120
+TAPAVLA+LR GATC+GK +MDEMAYSINGEN HYGTP NP APD VP
Sbjct: 133 ATAPAVLAVLRGGATCVGKVIMDEMAYSINGENAHYGTPTNPSAPDRVPGGSSSGSAVAV 192
Query: 121 XXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFARNPVI 180
KLVDFSLG+DTGGSVRVPASYC ILGFRPSHGVVS +GVIPMAQSFDTVGWF+RNPVI
Sbjct: 193 GAKLVDFSLGSDTGGSVRVPASYCGILGFRPSHGVVSVSGVIPMAQSFDTVGWFSRNPVI 252
Query: 181 LNHVGRVLLQLPDVDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVIYE 240
L HVGR+LLQLPDVD +P+QI IAEDCFQLSSIP RVSQ+LVKSVEKLFGG
Sbjct: 253 LKHVGRLLLQLPDVDRTKPNQIFIAEDCFQLSSIPKKRVSQVLVKSVEKLFGGD------ 306
Query: 241 LFWNPADSLGILRNIYMFCNGPSHVVKHLTLGDFVENKVPSLKHFMSKEIKEQGYDIXXX 300
+VKH+ LGD+VE+KVPSL+HFMSKEIKEQ Y+I
Sbjct: 307 ------------------------IVKHVNLGDYVEDKVPSLRHFMSKEIKEQEYNIAPL 342
Query: 301 XXXXXXXXXXERYEFKNNHGEWVTTVEPDLGPGISERVWEAVKMTGGNIDACYSVKXXXX 360
+RYEFK NHGEWVTTV+PD GPG+ ER+WEAV+ T NIDA SV+
Sbjct: 343 AALSSAMRMLQRYEFKTNHGEWVTTVKPDFGPGLKERIWEAVRSTEENIDAFQSVRTELR 402
Query: 361 XXXXXXXXDFGILAIPTVPGPPPKLNTDPTTLAVFRAEAFSLLSIAGVSGFCQVSIPLGM 420
+FGI+AIPTVPG PPKLNTDPTTL +FRA+AFSLLSI GVSGFCQVSIPLGM
Sbjct: 403 AALTNLLEEFGIIAIPTVPGVPPKLNTDPTTLEIFRAKAFSLLSITGVSGFCQVSIPLGM 462
Query: 421 HDDLPLSISLLAKNGSDGFLLNVVQILYDTLQEQV 455
HD LP+SISLLAK+GSD FLLNVV+ LYDTLQE+V
Sbjct: 463 HDGLPVSISLLAKHGSDVFLLNVVETLYDTLQEEV 497
>29806.m000976 amidase, putative
Length = 607
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/461 (42%), Positives = 261/461 (56%), Gaps = 35/461 (7%)
Query: 1 MARNPDYGAFMEKFVL----KPTNLSDELPLNGLTFAVKDIFEVDGYVTGFGNPDWARTH 56
M + D+GAF+EKF + + + + PL+GL+FA+KDIF+V YVTGFGNPDW RTH
Sbjct: 45 MIKREDFGAFIEKFEILPFPQAPPPAAKQPLSGLSFAIKDIFDVKDYVTGFGNPDWRRTH 104
Query: 57 LAATSTAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXX 116
A A AV A+L+ GATC+GKT+MDE+ I+GEN HYGTP+NP P VP
Sbjct: 105 EVAEKMAVAVTALLKNGATCVGKTIMDELGLGISGENLHYGTPMNPIMPSFVPGGSSSGS 164
Query: 117 XXXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFAR 176
+LVDF+LGTDT G +R+PA++C I G+RPSHG VS G IP AQS DTVGW AR
Sbjct: 165 AVTVAAELVDFALGTDTIGCIRIPAAFCGIFGYRPSHGTVSMIGAIPNAQSLDTVGWLAR 224
Query: 177 NPVILNHVGRVLLQLPDVDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFS 236
+P IL VG LL+L V+ + +II A+D FQL +P + ++ K++E L G Q
Sbjct: 225 DPSILRCVGHALLKLNAVEARKARRIIFADDLFQLCKVPKQKTEYVISKAIENLSGYQ-- 282
Query: 237 VIYELFWNPADSLGILRNIYMFCNGPSHVVKHLTLGDFVENKVPSLKHFMSKEIKEQGYD 296
+P KHL G ++ + VPSLK F+ + Q
Sbjct: 283 -------SP---------------------KHLNFGQYIASNVPSLKGFLEQSGNLQS-G 313
Query: 297 IXXXXXXXXXXXXXERYEFKNNHGEWVTTVEPDLGPGISERVWEAVKMTGGNIDACYSVK 356
+RYEFK NH EWV +V+P L P +S RV A+ T N+ Y ++
Sbjct: 314 TSALKALSSVMVSLQRYEFKTNHEEWVKSVKPKLAPDVSNRVLAAINATYENVKVLYKIR 373
Query: 357 XXXXXXXXXXXXDFGILAIPTVPGPPPKLNTDPTTLAVFRAEAFSLLSIAGVSGFCQVSI 416
D GIL IPTV PP KLNT L SIA +SG CQV++
Sbjct: 374 SEMRAATQSLLKDDGILVIPTVADPPLKLNTKKGYSPESHDRVIILSSIASMSGCCQVAV 433
Query: 417 PLGMHDDLPLSISLLAKNGSDGFLLNVVQILYDTLQEQVAV 457
PLG HDD P+S+S ++ +G+D FLL+ + +Y +LQ Q+++
Sbjct: 434 PLGKHDDCPISVSFISFHGADKFLLDTIVDMYLSLQAQISI 474
>29651.m000292 amidase, putative
Length = 589
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/427 (43%), Positives = 253/427 (59%), Gaps = 31/427 (7%)
Query: 29 GLTFAVKDIFEVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEMAYS 88
GLTFAV D+F+++GYVTGFG+PDWARTH AA+ T+ V A++ GATCIGKTV+DE+AYS
Sbjct: 60 GLTFAVSDVFDIEGYVTGFGHPDWARTHEAASQTSLVVSALVEGGATCIGKTVVDELAYS 119
Query: 89 INGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCSILG 148
INGEN+HYGTP NP P VP LVDFSLG DT G VRVPA +C I+G
Sbjct: 120 INGENEHYGTPTNPAVPARVPGGSSSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCGIIG 179
Query: 149 FRPSHGVVSTAGVIPMAQSFDTVGWFARNPVILNHVGRVLLQLPDVDLVRPSQIIIAEDC 208
FRPS+G + G++P++ S DTVGWFAR+P ++ VG +LLQLP P QIIIA+DC
Sbjct: 180 FRPSYGAIPNTGILPISASLDTVGWFARDPNVIRRVGHLLLQLPFGVQRNPKQIIIADDC 239
Query: 209 FQLSSIPNGRVSQILVKSVEKLFGGQFSVIYELFWNPADSLGILRNIYMFCNGPSHVVKH 268
FQL IP R++Q+++KS EK+FG Q V++H
Sbjct: 240 FQLLKIPVDRIAQVVIKSTEKIFGRQ------------------------------VLRH 269
Query: 269 LTLGDFVENKVPSLKHFMSKEIKEQGYDIXXXXXXXXXXXXXERYEFKNNHGEWVTTVEP 328
L D + ++V SLK ++ + RYEF++NH EW+ +P
Sbjct: 270 EILEDVLFSRVRSLKLLHDQKTNGE-LRTSSIRLLANIMRLLHRYEFRHNHEEWINIEKP 328
Query: 329 DLGPGISERVWEAVKMTGGNIDACYSVKXXXXXXXXXXXXDFGILAIPTVPGPPPKLNTD 388
++ IS ++ E V + I+ S++ D GIL IPT PPKL
Sbjct: 329 NVDHNISAQIHEIVDIPDTEIEIFKSIRQEMRAAINSLLKDDGILVIPTTAHLPPKLGGK 388
Query: 389 PTTLAVFRAEAFSLLSIAGVSGFCQVSIPLGMHDDLPLSISLLAKNGSDGFLLNVVQILY 448
++ FSLLSIA +SG CQV+IPLG+++ P+S+S +A++G D FL++ VQ +Y
Sbjct: 389 DMLSEDYQILLFSLLSIASLSGCCQVTIPLGLYEKCPVSVSFIARHGGDRFLMDTVQNMY 448
Query: 449 DTLQEQV 455
+LQEQV
Sbjct: 449 SSLQEQV 455
>29636.m000758 glutamyl-tRNA(gln) amidotransferase subunit A,
putative
Length = 561
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 26 PLNGLTFAVKD-IFEVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDE 84
PL G+ VKD I VD TG + A A +V + GA +GKT +DE
Sbjct: 111 PLAGVLVGVKDNICTVDMPSTG---GSRILENYRAPYDATSVKRLKEMGAIVVGKTNLDE 167
Query: 85 MAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYC 144
E + NP VP + SLG+DTGGSVR PAS+C
Sbjct: 168 FGMGSTTEGSAFQVTSNPWDVSRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPASFC 227
Query: 145 SILGFRPSHGVVSTAGVIPMAQSFDTVGW 173
++G +P++G VS G++ A S D +G
Sbjct: 228 GVVGLKPTYGRVSRFGLMSYASSLDVIGL 256
>55479.m000037 glutamyl-tRNA(gln) amidotransferase subunit A,
putative
Length = 228
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 12 EKFVLKPTNLSDELPLNGLTFAVKDIFEVDGYVTGFGNPDWARTHLAATSTAPAVLAILR 71
E+ V++ +L PL+GL +VKD+ V G FG+ A +LAA AP+V I
Sbjct: 60 EQAVMRGESLG---PLHGLPVSVKDLIAVGGVRQTFGSRVMA-DNLAA-GDAPSVERIKA 114
Query: 72 EGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGT 131
GA +GKT E G++ G NP P + F+LGT
Sbjct: 115 AGACIVGKTTTSEFGCKAVGDSPLTGVTRNPWDLSKTPGGSSCGAAASVAAGVTPFALGT 174
Query: 132 DTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQ--SFDTVGWFARN 177
D GGS+R PAS+C + G +P V V P++ + VG AR+
Sbjct: 175 DGGGSIRAPASFCGVFGIKPQFARVP---VFPVSATPTLGHVGPLARS 219
>30147.m014381 Glutamyl-tRNA(Gln) amidotransferase subunit A,
putative
Length = 581
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 10 FMEKFVLKPTNLSDEL--------PLNGLTFAVKDIFEVDGYVTGFGNPDWARTHLAATS 61
+ ++ K +DEL PL+G+ + +KDI V GY T +G+ + L +
Sbjct: 165 YTDELAYKQAKEADELLAKGVYLGPLHGIPYGLKDIIAVSGYKTTWGSRSFKDQVL---N 221
Query: 62 TAPAVLAILRE-GATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXX 120
V LR GA + K V +AY + G NP +
Sbjct: 222 IDAWVYKRLRSVGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAAST 278
Query: 121 XXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFARN 177
+V F++G++T GS+ PAS C + RP+ G V GV+ +++S D +G F R+
Sbjct: 279 SSGMVPFAIGSETAGSITYPASRCGVTALRPTLGTVGRTGVMSISESLDKLGPFCRS 335
>29804.m001523 glutamyl-tRNA(gln) amidotransferase subunit A,
putative
Length = 607
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 27 LNGLTFAVKDIFEVDGYVT-GFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEM 85
L+G+ A+KD ++D Y G W + A +V + G +GK M E+
Sbjct: 197 LDGIFMAIKD--DIDCYPHPSKGATTWMHEVRSVKKDAVSVSRLRSCGVIFVGKANMHEL 254
Query: 86 AYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCS 145
G N +YGT NP A D L +LGTD GGSVR+P+S C
Sbjct: 255 GMGTTGNNPNYGTTRNPHATDRYTGGSSSGPAAIVASGLCSAALGTDGGGSVRIPSSLCG 314
Query: 146 ILGFRPSHGVVSTAGVIPMAQSFDTVGWFARN 177
++G + ++G G + + + +G A +
Sbjct: 315 VVGLKTTYGRTDMEGSLCHYGTVEIIGPIASS 346
>29756.m000503 amidase, putative
Length = 519
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 63 APAVLAILREGATCIGKTVMDEMA-----YSINGENKHYGTPINPCAPDCVPXXXXXXXX 117
A V + R GA +GK M E A + NG G NP P
Sbjct: 133 AGVVAKLRRAGAIILGKASMTEWAAFRSNHLPNGYCARSGQGKNPYVLSADPCGSSSGSG 192
Query: 118 XXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFAR 176
LV S+GT+T GS+ P+S S++G +P+ G+ S AGV+P++ DTVG R
Sbjct: 193 ISVAANLVAVSIGTETDGSILCPSSANSVVGIKPTVGLTSRAGVVPISPRQDTVGPMCR 251
>33669.m000015 amidase, putative
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 24 ELPLNGLTFAVKDIFEVDGYVTGFGNPDWARTHLAATSTAPAVLAILRE-GATCIGKTVM 82
LPL GL +VK+ F + G G+ R A + A++ L+ GA I ++ +
Sbjct: 26 SLPLFGLPCSVKETFGLAGQEVTAGS---LRMAPQAHAEDAAIVGRLKAAGAVVIARSNV 82
Query: 83 DEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPAS 142
E A + N +G NP V F +G+D GS+R+PA+
Sbjct: 83 PEFAMTAESSNPRFGRTSNPLDLGRVAGGSSGGEGALVGSGGSAFGVGSDILGSIRIPAA 142
Query: 143 YCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFARNPV 179
+C ++GF+P V G P +T W A P+
Sbjct: 143 FCGVVGFKPHSRAVDQRGTWPTVTG-NTRSWLALGPL 178
>29756.m000502 amidase, putative
Length = 510
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 63 APAVLAILREGATCIGKTVMDEMA--YSI---NGENKHYGTPINPCAPDCVPXXXXXXXX 117
A V+ + + GA +GK M E A S+ NG + G NP P
Sbjct: 133 AGVVMKLRKTGAIILGKASMTEWAAFRSLKLPNGFSARGGQGKNPYVLSADPCGSSSGPA 192
Query: 118 XXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFAR 176
LV S+GT+T GS+ P++ S++G +P+ G+ S AGV+P++ DTVG R
Sbjct: 193 ISVAANLVAVSVGTETDGSILCPSNANSVVGIKPTVGLTSRAGVVPVSFRQDTVGPICR 251
>28930.m000010 glutamyl-tRNA(gln) amidotransferase subunit A,
putative
Length = 88
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 124 LVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVG 172
L +LG D GGSVR+PA+ C ++GF+P+ G V +GV+P+ + VG
Sbjct: 27 LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRVPHSGVLPLNWTVGMVG 75