Jatropha Genome Database

JcCB0075081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075081.10 - phase: 0 
         (386 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008760 mevalonate kinase, putative                             600   e-172
29656.m000490 mevalonate kinase, putative                             590   e-169

>30128.m008760 mevalonate kinase, putative
          Length = 386

 Score =  600 bits (1547), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 309/386 (80%), Positives = 330/386 (85%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTNVTLSFPTSENDGTLKLQLKDMALEF 60
           MEVKARAPGKIILSGEHAVVHGSTAVA++++LYT V++SFP+S NDGTLKLQLKD+ALEF
Sbjct: 1   MEVKARAPGKIILSGEHAVVHGSTAVAAALDLYTYVSISFPSSGNDGTLKLQLKDLALEF 60

Query: 61  SWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLWLY 120
           SWP+ KI+EALPNLG PS+STPTSCSIES+KSISALVEEQ+IPEAKIALASG++AFLWLY
Sbjct: 61  SWPVAKIREALPNLGVPSSSTPTSCSIESLKSISALVEEQDIPEAKIALASGVSAFLWLY 120

Query: 121 TSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGESE 180
           TSIQGF PATVVVTSD                            +VD+ HQGWL FG  +
Sbjct: 121 TSIQGFEPATVVVTSDLPLGSGLGSSAAYCVSLSAALLAFSDSVDVDRGHQGWLKFGVPD 180

Query: 181 LELLNKWAFEGEKIIHGKPSGIDNTVSTYGNMIKFRSGNLTRIKSNMLLKMLITNTRVGR 240
           LELLNKWAFEGEKIIHGKPSGIDNTVSTYGNMIKFRSGNLTR+KSNM LKMLITNTRVGR
Sbjct: 181 LELLNKWAFEGEKIIHGKPSGIDNTVSTYGNMIKFRSGNLTRMKSNMPLKMLITNTRVGR 240

Query: 241 NTKALVAGVSERTLRHPNAMSFVFNAVDSISNELATIIQSPAPDELSITXXXXXXXXXXX 300
           NTKALVAGVSERT RHPNAMSFVFNAVDSISNELA IIQSPAPDELSIT           
Sbjct: 241 NTKALVAGVSERTFRHPNAMSFVFNAVDSISNELANIIQSPAPDELSITEKEEMLEELME 300

Query: 301 XNQGLLQCMGVSHASIETVLRTTLKYKLASKLTGAGGGGCVLTLLPTLLSGTVVDKVIAE 360
            NQGLLQCMGVSHASIETVL+TTLKYKLASKLTGAGGGGCVLTLLPTLLSGTVVDKVIAE
Sbjct: 301 MNQGLLQCMGVSHASIETVLQTTLKYKLASKLTGAGGGGCVLTLLPTLLSGTVVDKVIAE 360

Query: 361 LESCGFQCLIAGIGGNGVEICFGGSS 386
           LES GFQCLIAGIGG+G EICF  SS
Sbjct: 361 LESSGFQCLIAGIGGDGAEICFASSS 386


>29656.m000490 mevalonate kinase, putative
          Length = 386

 Score =  590 bits (1522), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 302/386 (78%), Positives = 325/386 (84%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTNVTLSFPTSENDGTLKLQLKDMALEF 60
           MEVKARAPGK+ILSGEHAVVHGSTAVA+SI+LYT V+LSFP+S ND TLKLQLKD+AL+F
Sbjct: 1   MEVKARAPGKVILSGEHAVVHGSTAVAASIDLYTYVSLSFPSSGNDDTLKLQLKDLALDF 60

Query: 61  SWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLWLY 120
           SWPI +IKEALPNLG PS+STPTSCSIE +KS+SALVEEQN PEAKI LASG +AFLWLY
Sbjct: 61  SWPIARIKEALPNLGVPSSSTPTSCSIELIKSMSALVEEQNFPEAKIGLASGASAFLWLY 120

Query: 121 TSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGESE 180
           TSIQGF+PATV+VTSD                            N+D+   GWL+FG  E
Sbjct: 121 TSIQGFKPATVIVTSDLPLGSGLGSSAAFCVALSAALLAFSDSVNLDREQHGWLMFGVPE 180

Query: 181 LELLNKWAFEGEKIIHGKPSGIDNTVSTYGNMIKFRSGNLTRIKSNMLLKMLITNTRVGR 240
           LELLNKWAFEGEKIIHGKPSGIDNT+STYGNMIKFRSGNLTR+ S+M LKMLITNTRVGR
Sbjct: 181 LELLNKWAFEGEKIIHGKPSGIDNTISTYGNMIKFRSGNLTRMNSSMPLKMLITNTRVGR 240

Query: 241 NTKALVAGVSERTLRHPNAMSFVFNAVDSISNELATIIQSPAPDELSITXXXXXXXXXXX 300
           NTKALVAGVSERTLRHPNAMSFVFNAVDSISNELA IIQSPAPDELSIT           
Sbjct: 241 NTKALVAGVSERTLRHPNAMSFVFNAVDSISNELAKIIQSPAPDELSITEKEEKLEELME 300

Query: 301 XNQGLLQCMGVSHASIETVLRTTLKYKLASKLTGAGGGGCVLTLLPTLLSGTVVDKVIAE 360
            NQGLLQCMGVSHASIETVLR TLKYKLASKLTGAGGGGCVLTLLPTLLSGT+VDKVIAE
Sbjct: 301 MNQGLLQCMGVSHASIETVLRITLKYKLASKLTGAGGGGCVLTLLPTLLSGTIVDKVIAE 360

Query: 361 LESCGFQCLIAGIGGNGVEICFGGSS 386
           LESCGF CL+AGIGGNGV+ICF G S
Sbjct: 361 LESCGFHCLVAGIGGNGVKICFAGKS 386