Jatropha Genome Database

JcCB0071301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0071301.10 - phase: 0 
         (198 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29983.m003305 serine palmitoyltransferase I, putative                 335   8e-93
30131.m006861 serine palmitoyltransferase, putative                    47   7e-06

>29983.m003305 serine palmitoyltransferase I, putative
          Length = 482

 Score =  335 bits (859), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 168/199 (84%), Positives = 180/199 (90%), Gaps = 1/199 (0%)

Query: 1   MSSTVL-HIMNSALEWVTVALDAPSARAVVFGVHIGGHLFVEGLLFVVILFLLTQKSYKP 59
           M S  L   +N+ ++WV VALDAPSARAVVFGVHIGGHLFVEGLL VVILFLL+QKSYKP
Sbjct: 1   MGSVFLSQFVNTTIDWVKVALDAPSARAVVFGVHIGGHLFVEGLLLVVILFLLSQKSYKP 60

Query: 60  PKRPLTKKEIDELCNEWVPEPLIPAISEEMQHEPPALESAAGPHTKINGKEVVNFASANY 119
           PKRPLT KEIDELC +WVPEPLIP I++EMQ+EP  LESAAGPH  IN KEVVNFASANY
Sbjct: 61  PKRPLTNKEIDELCEDWVPEPLIPPITQEMQYEPAVLESAAGPHAIINSKEVVNFASANY 120

Query: 120 LGLIGHEKLIESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPNSILYSYGL 179
           LGLIGH+KL+ESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP+SILYSYGL
Sbjct: 121 LGLIGHDKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGL 180

Query: 180 STTFSTIPCFCKKGDIIVV 198
           ST FS IPCFCKKGDIIVV
Sbjct: 181 STMFSAIPCFCKKGDIIVV 199


>30131.m006861 serine palmitoyltransferase, putative
          Length = 488

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 107 NGKEVVNFASANYLGLIGHEKLIESCT----SALEKYGVGSCGPRGFYGTIDVHLDCEAR 162
           N    +N  S NYLG    +   E CT     +L+KY   +C  R   GT  +H + E  
Sbjct: 98  NMSRCLNLGSYNYLGFAAAD---EYCTPRVIESLKKYSPSTCSSRVEGGTTALHNELEKC 154

Query: 163 IAKFLGTPNSILYSYGLSTTFSTIPCFCKKGDIIV 197
           +A F+G   +I++  G  T  + +P    KG +I+
Sbjct: 155 VADFVGKSAAIVFGMGYVTNSAILPVLMGKGSLII 189