Jatropha Genome Database

JcCB0070851.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0070851.20 - phase: 0 
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008757 conserved hypothetical protein                          159   6e-40

>30128.m008757 conserved hypothetical protein
          Length = 191

 Score =  159 bits (401), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 96/118 (81%), Gaps = 2/118 (1%)

Query: 11  DSLKISPSREFEDYILQNLPADSHKALNSWQPVEVSIHDVDTDETFKVNLAKKQSFWSEP 70
           DSLKISPSREFED ILQN+ A SHKAL +WQP+E+SI+DVDT ET+KV+LAKK+SFW EP
Sbjct: 46  DSLKISPSREFEDIILQNISAASHKALETWQPIEISIYDVDTHETYKVHLAKKESFWFEP 105

Query: 71  LPDVGQK--KVASSDLTITMENCFDEYKDMSEMFAYSLHPFRQIIKKRKLSYDQEIGL 126
           LPD+GQK  K A+S +    ++ ++  + ++E FAYSL PFR I+KKR LSYDQEIGL
Sbjct: 106 LPDIGQKQQKSATSGIITAPKSSYESKEMIAENFAYSLQPFRHIVKKRGLSYDQEIGL 163