Jatropha Genome Database

JcCB0068571.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0068571.20 - phase: 0 
         (79 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006987 Light-regulated protein precursor, putative             125   3e-30
30128.m008548 Light-regulated protein precursor, putative             102   3e-23

>30131.m006987 Light-regulated protein precursor, putative
          Length = 140

 Score =  125 bits (315), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 63/80 (78%), Positives = 70/80 (87%), Gaps = 5/80 (6%)

Query: 3   SVFPAEACETIGGEACLADIYPEVKLEREARNEAG---IASEPIEREYLDYNDAKTVFVG 59
           SVFPAEACET+GG+ACLA+I+PEVKLE  ARN+A    IASEPIEREYL+YNDAKTVF  
Sbjct: 63  SVFPAEACETLGGDACLANIFPEVKLE--ARNDAAAARIASEPIEREYLEYNDAKTVFCA 120

Query: 60  EACDDLGGEFCGFEYQKGVY 79
           EACDDLGGEFC  EYQ+GVY
Sbjct: 121 EACDDLGGEFCSREYQRGVY 140


>30128.m008548 Light-regulated protein precursor, putative
          Length = 133

 Score =  102 bits (255), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/76 (67%), Positives = 59/76 (77%), Gaps = 2/76 (2%)

Query: 3   SVFPAEACETIGGEACLADIYPEVKLEREARNE--AGIASEPIEREYLDYNDAKTVFVGE 60
           SVFPAEACETIGGE C  D+YPEVKL+ EA +   A  A+E I+REYL Y+  KTVF+ E
Sbjct: 57  SVFPAEACETIGGEVCDVDMYPEVKLKPEAESTTAASTATEHIDREYLQYDSPKTVFLEE 116

Query: 61  ACDDLGGEFCGFEYQK 76
           ACDDLGGEFC  EYQ+
Sbjct: 117 ACDDLGGEFCDPEYQR 132