Jatropha Genome Database

JcCB0068361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0068361.10 + phase: 0 /partial
         (135 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003510 alkaline phytoceramidase, putative                      247   1e-66
29904.m002905 alkaline phytoceramidase, putative                      201   9e-53

>29842.m003510 alkaline phytoceramidase, putative
          Length = 255

 Score =  247 bits (630), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 118/135 (87%), Positives = 122/135 (90%)

Query: 1   MADGISSFWGPVTSTTECCEKNYANSSYIAEFYNTISNIPCXXXXXXXXXXXXRQQFEKR 60
           MADGISSFWGPVTSTTECCEKNYA+SSYIAEFYNTISNIPC            RQ+FEKR
Sbjct: 1   MADGISSFWGPVTSTTECCEKNYAHSSYIAEFYNTISNIPCILLALIGLINALRQRFEKR 60

Query: 61  FSVLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYLYILYSPDWHYHSTMPTFL 120
           FSVLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLY+YILYSPDWHY STMPTFL
Sbjct: 61  FSVLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYMYILYSPDWHYRSTMPTFL 120

Query: 121 FLYGAVFAMVHSVVH 135
           FLYGAVFA+VHSVVH
Sbjct: 121 FLYGAVFAIVHSVVH 135


>29904.m002905 alkaline phytoceramidase, putative
          Length = 234

 Score =  201 bits (511), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 98/133 (73%), Positives = 106/133 (79%), Gaps = 1/133 (0%)

Query: 3   DGISSFWGPVTSTTECCEKNYANSSYIAEFYNTISNIPCXXXXXXXXXXXXRQQFEKRFS 62
            GISSFWGPVTS  E CEKNYA SSYIAEF+NTISN+P             RQ+FEKRFS
Sbjct: 4   GGISSFWGPVTSP-EWCEKNYAYSSYIAEFFNTISNVPGILLAFIGLINALRQRFEKRFS 62

Query: 63  VLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYLYILYSPDWHYHSTMPTFLFL 122
           VLHISNMIL IGS+ +HATLQR+QQQ DETPMVWEMLLY YILYSPDWHY STMPTFLF 
Sbjct: 63  VLHISNMILGIGSISYHATLQRMQQQGDETPMVWEMLLYFYILYSPDWHYRSTMPTFLFF 122

Query: 123 YGAVFAMVHSVVH 135
           YGA FA+ HS+V 
Sbjct: 123 YGAAFAVFHSLVR 135