Jatropha Genome Database

JcCB0067191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0067191.20 - phase: 0 /pseudo/partial
         (323 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014336 Cell division protease ftsH, putative                   328   3e-90
28838.m000257 Cell division protein ftsH, putative                    124   5e-29
29794.m003305 Protein YME1, putative                                  109   2e-24
29993.m001041 Cell division protein ftsH, putative                    105   4e-23
29767.m000207 Mitochondrial respiratory chain complexes assembly...    92   4e-19
30169.m006526 ATP-dependent peptidase, putative                        86   2e-17
30169.m006301 Cell division protein ftsH, putative                     66   2e-11
29680.m001720 metalloprotease m41 ftsh, putative                       56   2e-08
29681.m001304 Cell division protein ftsH, putative                     54   1e-07

>30170.m014336 Cell division protease ftsH, putative
          Length = 692

 Score =  328 bits (840), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 158/166 (95%), Positives = 163/166 (98%)

Query: 158 QAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVTTGASNDFMQVS 217
            AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG DNVTTGASNDFMQVS
Sbjct: 527 HAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDDNVTTGASNDFMQVS 586

Query: 218 RVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVERAY 277
           RVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVE+AY
Sbjct: 587 RVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVEKAY 646

Query: 278 ARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 323
           +RAK IITTHIDILHKLAQLL+EKETVDGEEFMSLFIDGKAEL+V+
Sbjct: 647 SRAKQIITTHIDILHKLAQLLVEKETVDGEEFMSLFIDGKAELYVS 692


>28838.m000257 Cell division protein ftsH, putative
          Length = 1157

 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 108/174 (62%), Gaps = 5/174 (2%)

Query: 141 IMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 200
           + P +DPV K+++IPRGQA GLT+F P E+     L S+  L  ++   LGGR AEE+IF
Sbjct: 482 LTPGHDPVQKVTLIPRGQARGLTWFTPGED---PTLISKQQLFARIVGGLGGRAAEEIIF 538

Query: 201 GQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQKDYSM 259
           G+  +TTGA+ D  QV+ +A+QMV  FG S +IG  A+  P   +  +  +M ++   S 
Sbjct: 539 GESEITTGAAGDLQQVTEIAKQMVTIFGMS-EIGPWALTDPAVQSTDVVLRMLARNSMSE 597

Query: 260 ATADVVDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLF 313
             A  +D  +R+++ERA+  AK  +  + D + KL  +L+EKET+ G+EF ++ 
Sbjct: 598 KLAQDIDTSIRDIIERAHEIAKEHVRNNRDAIDKLVDILLEKETLTGDEFRAIL 651


>29794.m003305 Protein YME1, putative
          Length = 716

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 96/167 (57%), Gaps = 13/167 (7%)

Query: 147 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVT 206
           PV K +I+PRG + G+    P ++       SR  +  ++ V +GGRVAEE+IFG++ VT
Sbjct: 499 PVHKATIVPRGMSLGMVAQLPDKDETS---ISRKQMLARLDVCMGGRVAEELIFGENEVT 555

Query: 207 TGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVD 266
           +GAS+D  Q +++AR MV ++G SK++G V                + K  S  T  +++
Sbjct: 556 SGASSDLQQATKLARAMVTKYGMSKEVGVVT----------HNYDDNGKSMSTETRLLIE 605

Query: 267 AEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLF 313
            EV+  +E+AY  AK I+TTH   LH LA  L+E ET+ G +  +L 
Sbjct: 606 QEVKNFLEKAYNNAKTILTTHSKELHALANALLEHETLTGSQIKALL 652


>29993.m001041 Cell division protein ftsH, putative
          Length = 701

 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 108/182 (59%), Gaps = 6/182 (3%)

Query: 141 IMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 200
           + P +D V K+++IPRGQA GLT+F P+++     L S+  L  ++   LGGR AEEVIF
Sbjct: 510 LTPGHDAVQKVTLIPRGQARGLTWFIPADDPT---LISKQQLFARIVGGLGGRAAEEVIF 566

Query: 201 GQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMA 260
           G+  VTTGA+ D  Q++ +A+QMV  FG S+      +     +  +  +M ++   S  
Sbjct: 567 GEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDSSAQSADVIMRMMARNSMSER 626

Query: 261 TADVVDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEF---MSLFIDGK 317
            A+ +D+ ++ L + AY  A   I  + + + K+ ++L+EKET+ G+EF   +S F++  
Sbjct: 627 LAEDIDSAIKRLSDSAYEIALSHIRNNREAIDKIVEVLLEKETMTGDEFRAILSEFVEIP 686

Query: 318 AE 319
           AE
Sbjct: 687 AE 688


>29767.m000207 Mitochondrial respiratory chain complexes assembly
           protein AFG3, putative
          Length = 833

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 93/166 (56%), Gaps = 13/166 (7%)

Query: 146 DPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDN 204
           +P+ K++I+PRG A  G   + P+E  L     ++  L +   + LGGR AE+V+ G+  
Sbjct: 626 EPLLKVTIVPRGTAALGFAQYVPNENLL----MTKEQLFDVTCMTLGGRAAEQVLLGK-- 679

Query: 205 VTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADV 264
           ++TGA ND  +V+++    V  +GFS K+G ++       P         K YS  T  +
Sbjct: 680 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF------PQRDDTFEMSKPYSSKTGAI 733

Query: 265 VDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFM 310
           +D+EVRE V +AY R   ++  H + + ++A+LL+EKE +  E+ +
Sbjct: 734 IDSEVREWVGKAYQRTLQLVEEHKEHIAEIAELLLEKEVLHQEDLI 779


>30169.m006526 ATP-dependent peptidase, putative
          Length = 821

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 87/168 (51%), Gaps = 18/168 (10%)

Query: 147 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVT 206
           P+ K +I+PRG A G+    PS +       S+  L  ++ V +GGRVAEE+IFGQD+VT
Sbjct: 649 PIHKATIMPRGSALGMVTQLPSNDETS---ISKKQLLARLDVCMGGRVAEELIFGQDHVT 705

Query: 207 TGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVD 266
           TGAS+D    + +A  MV   G S  IG V I               ++  S      +D
Sbjct: 706 TGASSDLHTATELAHYMVSNCGMSDAIGPVHI---------------KERPSSEMQSRID 750

Query: 267 AEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLFI 314
           AEV +L+  AY R K ++  H   LH LA  L+E ET+  E+   + +
Sbjct: 751 AEVVKLLREAYDRVKKLLKKHEKALHALANALLEYETLSAEDIKRILL 798


>30169.m006301 Cell division protein ftsH, putative
          Length = 993

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 141 IMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 200
           + P +D  A   ++P G+   ++ F P E+ ++ G  +  Y++ QM V  GGR AE ++F
Sbjct: 764 LFPHFDWHAFSQLLPGGKETAISVFYPREDMIDQGYTTFGYMKMQMVVTHGGRCAERLVF 823

Query: 201 GQDNVTTGASNDFMQVSRVARQMV 224
           G D++T G S+D  +++++AR+MV
Sbjct: 824 G-DDITDGGSDDLEKITKIAREMV 846


>29680.m001720 metalloprotease m41 ftsh, putative
          Length = 1312

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 19/175 (10%)

Query: 141  IMPEYDPVAKISIIPRGQAG-GLTFF--APSEERLESGLYSRSYLENQMAVALGGRVAEE 197
            ++P +D V  + + P    G G T    A SE  L   + SRSYLE ++    G  VA +
Sbjct: 1090 LLPNFDVVDNLWLEPFSWQGIGCTKISKAKSEGSLNGNVESRSYLEKKLVFCFGSYVASQ 1149

Query: 198  VI--FGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQK 255
            ++  FG++N  +  S++  Q   +A +MV ++G+          GP  +P +    ++  
Sbjct: 1150 LLLPFGEENFLS--SSELRQAQEIATRMVIQYGW----------GPDDSPAIYYSKNAVT 1197

Query: 256  DYSMATADVVD--AEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEE 308
              SM      D   +V ++ + AY +A+ ++  +  +L K+   L+E E + G++
Sbjct: 1198 SLSMGNNHEYDMATKVEKMYDLAYLKAREMLQKNQRVLEKIVDELLEFEILTGKD 1252


>29681.m001304 Cell division protein ftsH, putative
          Length = 816

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 16/195 (8%)

Query: 141 IMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVI 199
           ++P    V K+SI+PR G A G T+  P+ E  +  L     L  ++   LGGR AEEV+
Sbjct: 619 LLPGQPRVEKLSILPRSGGALGFTYTPPTNE--DRYLLFIDELRGRIVTLLGGRAAEEVV 676

Query: 200 FGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSM 259
           +    V+TGA +D  + + +A + V  +G ++ IG +++    G        +       
Sbjct: 677 Y-SGRVSTGALDDIRRATDMAYKAVAEYGLNQTIGPLSLATLSGGGMDESGAAPWGRDQG 735

Query: 260 ATADVVDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEK------------ETVDGE 307
              D+V  EV+ L++ A   A  ++  +  +L  L   L EK            + V   
Sbjct: 736 HLVDLVQREVKVLLQSALEVALLVVRANPTVLEGLGAHLEEKEKVEGEELQEWLKLVVAP 795

Query: 308 EFMSLFIDGKAELFV 322
           + +SLFI GK E  V
Sbjct: 796 KELSLFIKGKQESLV 810