Jatropha Genome Database

JcCB0067131.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0067131.10 - phase: 0 /partial
         (183 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004501 conserved hypothetical protein                          282   7e-77

>29929.m004501 conserved hypothetical protein
          Length = 1065

 Score =  282 bits (721), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 139/183 (75%), Positives = 147/183 (80%), Gaps = 7/183 (3%)

Query: 1   MTVSSVSADDRSATLSGGGYRDAEALFRSKPISQIRNVEATTRKQIQDKKEELRQLVGNR 60
           M VSS SADDRSATLSGGG+RDAE LFRSK IS+IRNVEATTRKQI DKKEELRQLVGNR
Sbjct: 1   MRVSSASADDRSATLSGGGFRDAETLFRSKTISEIRNVEATTRKQIDDKKEELRQLVGNR 60

Query: 61  YRDLIDSADSIVLMKSSCESISSNVAXXXXXXXXXXXXXXXETPKFTNSNPVRIRIYGIA 120
           YRDLIDSADSIVLMKSSC SI SN+A               +TPKFTN NP R+RIYGIA
Sbjct: 61  YRDLIDSADSIVLMKSSCHSIYSNIASIQTNITSLSASPVSQTPKFTNPNPARLRIYGIA 120

Query: 121 CRVKYLVDTPENIWGCLDESMFLEAAGRYIRAKHVHYNLMQANNANAEWDHTKILSNFPL 180
           CRVKYLVDTPENIWGCLDESMFLEAA RYIRAKHVH+NL   ++        KILSNFPL
Sbjct: 121 CRVKYLVDTPENIWGCLDESMFLEAAARYIRAKHVHFNLNSTSDP-------KILSNFPL 173

Query: 181 LQH 183
           LQH
Sbjct: 174 LQH 176