Jatropha Genome Database

JcCB0066311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0066311.10 - phase: 0 /partial
         (243 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29680.m001689 l-allo-threonine aldolase, putative                     438   e-123

>29680.m001689 l-allo-threonine aldolase, putative
          Length = 358

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/243 (87%), Positives = 229/243 (94%), Gaps = 8/243 (3%)

Query: 1   MVTRTVDLRSDTVTKPTEAMRAAMANAEVDDDVLGDDPNALRLQTEMARIMGKEAALFVP 60
           MV RTVDLRSDTVTKPTEAMRAAMANAEVDDDVLG DP+A RL+TEMA+IMGKEAAL+VP
Sbjct: 1   MVMRTVDLRSDTVTKPTEAMRAAMANAEVDDDVLGYDPSAFRLETEMAKIMGKEAALYVP 60

Query: 61  SGTMGNLISVLVHCDIRGSEVILGHDSHIHIYENGGISTLGGVHPRTVKNNKDGTMDIDL 120
           SGTMGNLISVLVHC+IRGSEVILGH+SHIHI+ENGGISTLGGVHPRTV+NNKDGTMDIDL
Sbjct: 61  SGTMGNLISVLVHCNIRGSEVILGHNSHIHIFENGGISTLGGVHPRTVQNNKDGTMDIDL 120

Query: 121 IEAAIRDPKWQLVYPTTRLICLENSHANCGGRCLSVEYTDKVGELAKKYGLKLHIDGARI 180
           IEAAIRDP+ +LVYPTTRLICLENSHANCGGRCLSVEYTD+VGELAKK+GLKLHIDGARI
Sbjct: 121 IEAAIRDPRGELVYPTTRLICLENSHANCGGRCLSVEYTDRVGELAKKHGLKLHIDGARI 180

Query: 181 FNAAAALKVPVHRLVQAADSVSVCLSKGLGAPVGTVIVGSKSFIAKVLTEICFESRILRK 240
           FNAA AL VPVHRLVQAADSVSVCLSKGLGAPVG+VIVGS+SFIAK        +R+LRK
Sbjct: 181 FNAAVALGVPVHRLVQAADSVSVCLSKGLGAPVGSVIVGSESFIAK--------ARVLRK 232

Query: 241 TLG 243
           TLG
Sbjct: 233 TLG 235