Jatropha Genome Database

JcCB0064981.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0064981.30 + phase: 0 
         (291 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29596.m000719 GATA transcription factor, putative                     387   e-108
29838.m001723 hypothetical protein                                    215   2e-56
29838.m001724 GATA transcription factor, putative                     197   4e-51
29596.m000720 GATA transcription factor, putative                     186   1e-47
30138.m004044 sensory transduction histidine kinase, putative          61   5e-10
30130.m000280 sensory transduction histidine kinase, putative          54   6e-08
29758.m000642 Two-component response regulator ARR2, putative          53   1e-07
29805.m001503 sensory transduction histidine kinase, putative          52   2e-07
30174.m008809 GATA transcription factor, putative                      51   6e-07
27494.m000044 GATA transcription factor, putative                      51   7e-07
29904.m003012 GATA transcription factor, putative                      51   8e-07
30076.m004450 sensory transduction histidine kinase, putative          49   2e-06
29866.m000621 conserved hypothetical protein                           48   5e-06
27538.m000326 GATA transcription factor, putative                      47   7e-06

>29596.m000719 GATA transcription factor, putative
          Length = 327

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/264 (75%), Positives = 207/264 (78%), Gaps = 17/264 (6%)

Query: 1   MAAANPQPLQARPYEEHVREPIRIXXXXXXXXXXXXXXXXXXXH--MNSXXXXXXXXXXX 58
           MAAANP PLQARPYE+HV+ PI+I                   +  MNS           
Sbjct: 1   MAAANPLPLQARPYEDHVQAPIQIDDDDVREYEDGDAMDDVEDNTPMNSGVNVAEHGGGG 60

Query: 59  XXXXXXXXXXXSRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTAVPTIEV--- 115
                      SRTSELTLSFEGEV+VFPAVTPEKVQAVLLLLGGRDIPTAVPTIEV   
Sbjct: 61  VIVA-------SRTSELTLSFEGEVFVFPAVTPEKVQAVLLLLGGRDIPTAVPTIEVPCV 113

Query: 116 -----IGDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASL 170
                + DTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASL
Sbjct: 114 QNNRGVDDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASL 173

Query: 171 KESSGGSNWDSAQSCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLM 230
           KESSGGS+WDSAQSCLQDGTPR ETV+RRCQHCGVSENNTPAMRRGPAGPRTLCNACGLM
Sbjct: 174 KESSGGSSWDSAQSCLQDGTPRPETVVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLM 233

Query: 231 WANKGTLRDLSKGGRNVSIDQIEP 254
           WANKGTLRDLSKGGRN S DQIEP
Sbjct: 234 WANKGTLRDLSKGGRNASTDQIEP 257


>29838.m001723 hypothetical protein
          Length = 313

 Score =  215 bits (548), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/147 (74%), Positives = 123/147 (83%), Gaps = 10/147 (6%)

Query: 112 TIEVIGD--TPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFAS 169
           T + +GD  T + S LSRRIASLVRFREKRKERCF+KKIRYT RKEVAQRMHRKNGQFAS
Sbjct: 59  TFQSLGDSDTSRESKLSRRIASLVRFREKRKERCFEKKIRYTCRKEVAQRMHRKNGQFAS 118

Query: 170 LKE--SSG-GSNWDSAQSCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNA 226
           LK+  S+G GSNW+ + +     TP++E +L RCQHCG SEN TPAMRRGPAGPRTLCNA
Sbjct: 119 LKDCYSTGTGSNWEPSNT-----TPQSEPILHRCQHCGTSENATPAMRRGPAGPRTLCNA 173

Query: 227 CGLMWANKGTLRDLSKGGRNVSIDQIE 253
           CGLMWANKGTLRDL+KGGR+VS DQ E
Sbjct: 174 CGLMWANKGTLRDLTKGGRHVSFDQNE 200


>29838.m001724 GATA transcription factor, putative
          Length = 311

 Score =  197 bits (502), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/184 (61%), Positives = 128/184 (69%), Gaps = 18/184 (9%)

Query: 72  TSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTAVPTIEVIG-------DTPKRSN 124
           + +LTLSF+GEVYVF AV+P+KVQAVLLLLGG +IP+ +PT E +        D   RS 
Sbjct: 85  SDQLTLSFQGEVYVFDAVSPDKVQAVLLLLGGYEIPSGIPTTETVSLNQRGYTDLSGRST 144

Query: 125 LSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESS-----GGSNW 179
              R ASL RFREKRKERCFDKKIRYTVRKEVA RM RK GQF S K SS     G S W
Sbjct: 145 QPHRAASLRRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFTSSKNSSDEMGSGSSLW 204

Query: 180 DSAQSCLQDGTPRTETVLR-RCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLR 238
              Q   QD     E+++   C HCG+S  +TP MRRGPAGPRTLCNACGL WANKG LR
Sbjct: 205 SGPQGSGQD-----ESLMETSCTHCGISSKSTPMMRRGPAGPRTLCNACGLKWANKGILR 259

Query: 239 DLSK 242
           DLSK
Sbjct: 260 DLSK 263


>29596.m000720 GATA transcription factor, putative
          Length = 324

 Score =  186 bits (472), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/173 (53%), Positives = 117/173 (67%), Gaps = 12/173 (6%)

Query: 72  TSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTAVPTIEV--------IGDTPKRS 123
           +S+LTL+F G+VYVF AVTP+KVQAVLLLLGG ++ +    +EV        + D P R 
Sbjct: 78  SSQLTLTFRGQVYVFDAVTPDKVQAVLLLLGGCELTSGPHGLEVASQNQRSAVVDYPGRC 137

Query: 124 NLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSGGSNWDSAQ 183
              +R ASL RFR+KRKER FDKK+RY+VR+EVA RM R  GQF S K+S G   W   Q
Sbjct: 138 TQPQRAASLNRFRQKRKERNFDKKVRYSVRQEVALRMQRNKGQFTSSKKSDGTYGWGGGQ 197

Query: 184 SCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 236
              QD + +  +    C HCG S  +TP MRRGP+GPR+LCNACGL WAN+G+
Sbjct: 198 DSGQDDSQQETS----CTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGS 246


>30138.m004044 sensory transduction histidine kinase, putative
          Length = 550

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 36/47 (76%)

Query: 121 KRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 167
           K   L RR A+L++FR+KRKERCFDKKIRY  RK++A+R  R  GQF
Sbjct: 460 KIKKLDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQF 506


>30130.m000280 sensory transduction histidine kinase, putative
          Length = 807

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 37/53 (69%)

Query: 115 VIGDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 167
           + G+      L++R A+L +FR+KRKERCF+K++RY  RK +A++  R  GQF
Sbjct: 695 ISGNAVDEDRLAQREAALSKFRQKRKERCFEKRVRYQSRKRLAEQRPRVKGQF 747


>29758.m000642 Two-component response regulator ARR2, putative
          Length = 659

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 34/42 (80%)

Query: 126 SRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 167
           ++R A+L +FR+KRKERCF+KK+RY  RK++A++  R  GQF
Sbjct: 603 AQREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQF 644


>29805.m001503 sensory transduction histidine kinase, putative
          Length = 762

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 5/68 (7%)

Query: 117 GDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSGG 176
           GD  K    S+R  +L +FR+KRKERCF KK+RY  RK +A++  R  GQF  ++++  G
Sbjct: 700 GDQNK---FSQREVALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQF--VRQTGNG 754

Query: 177 SNWDSAQS 184
           S   +++S
Sbjct: 755 STSKASES 762


>30174.m008809 GATA transcription factor, putative
          Length = 235

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)

Query: 190 TPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMW 231
           +P TE  +RRC HC  +   TP  R GP GP+TLCNACG+ +
Sbjct: 150 SPTTEGGIRRCTHC--ASEKTPQWRTGPLGPKTLCNACGVRY 189


>27494.m000044 GATA transcription factor, putative
          Length = 359

 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 181 SAQSCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMW 231
           SA++      P  +  +R+C HC +++  TP  R GP GP+TLCNACG+ +
Sbjct: 244 SAETSHDSSPPPQQQAVRKCMHCEITK--TPQWRAGPMGPKTLCNACGVRY 292


>29904.m003012 GATA transcription factor, putative
          Length = 205

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 2/35 (5%)

Query: 195 TVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGL 229
           T+ R+CQHCG  +  TP  R GP GP+TLCNACG+
Sbjct: 121 TIGRKCQHCGAEK--TPQWRAGPLGPKTLCNACGV 153


>30076.m004450 sensory transduction histidine kinase, putative
          Length = 697

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 31/43 (72%)

Query: 125 LSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 167
            S+R A+L +FR KRK+RC++KK+RY  RK +A+   R  GQF
Sbjct: 638 FSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAELRPRVKGQF 680


>29866.m000621 conserved hypothetical protein
          Length = 667

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 32/41 (78%)

Query: 127 RRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 167
           +R A+L +FR KRK+RC++KK+RY  RK++A++  R  GQF
Sbjct: 615 QREAALNKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQF 655


>27538.m000326 GATA transcription factor, putative
          Length = 323

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)

Query: 197 LRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMW 231
           +R+C HC V++  TP  R GP GP+TLCNACG+ +
Sbjct: 234 IRKCTHCEVTK--TPQWREGPMGPKTLCNACGVRY 266