Jatropha Genome Database

JcCB0060001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0060001.10 + phase: 0 
         (407 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002669 phosphoribulose kinase, putative                        760   0.0  
29917.m002028 uridine cytidine kinase I, putative                      79   4e-15
30154.m001150 uridine cytidine kinase I, putative                      74   1e-13
30190.m010949 Uracil phosphoribosyltransferase, putative               73   2e-13
30138.m003855 uridine cytidine kinase I, putative                      60   2e-09
30174.m009044 uridine cytidine kinase I, putative                      59   3e-09

>30068.m002669 phosphoribulose kinase, putative
          Length = 403

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/407 (91%), Positives = 379/407 (93%), Gaps = 4/407 (0%)

Query: 1   MAICTVYTTQSLNSTCTISTPGKTHLGFNQKHVVFLNSSCGKRNXXXXXXXXXXXXXXXX 60
           MAICTVYTTQSLNSTC+ISTPGKTHLGFNQK VVF +    KR                 
Sbjct: 1   MAICTVYTTQSLNSTCSISTPGKTHLGFNQKQVVFYSKRTNKR---ATSTSVITCSADDS 57

Query: 61  ETVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLD 120
           +TVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLD
Sbjct: 58  QTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLD 117

Query: 121 RTGRKEKGVTALDPRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPPKILV 180
           RTGRKEKGVTALDPRANDFDLMYEQVKAIK+G+ VEKPIYNHVTGLLDPPELIKPPKILV
Sbjct: 118 RTGRKEKGVTALDPRANDFDLMYEQVKAIKDGVAVEKPIYNHVTGLLDPPELIKPPKILV 177

Query: 181 IEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFD 240
           IEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFD
Sbjct: 178 IEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFD 237

Query: 241 AYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTISWIP 300
           AYIDPQKQYADAVIEVLPTQLIPDD EGKVLRVRLIMKEGVK F+PVYLFDEGSTISWIP
Sbjct: 238 AYIDPQKQYADAVIEVLPTQLIPDD-EGKVLRVRLIMKEGVKNFNPVYLFDEGSTISWIP 296

Query: 301 CGRKLTCSYPGIKFAYAPDTYFGHEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEVT 360
           CGRKLTCSYPGIKF Y P+TYFGHEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEVT
Sbjct: 297 CGRKLTCSYPGIKFFYGPETYFGHEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEVT 356

Query: 361 QQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIVASKAKTPVEAKA 407
           QQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQI+ASKAKTPVEAKA
Sbjct: 357 QQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIASKAKTPVEAKA 403


>29917.m002028 uridine cytidine kinase I, putative
          Length = 462

 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 21/195 (10%)

Query: 64  VIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTG 123
           VIG+A  +  GK+T    + S              D   L+ +  +      YHSL+   
Sbjct: 39  VIGVAGGTASGKTTVCNLIISQLH-----------DQGVLLINQDSF-----YHSLNDEQ 82

Query: 124 RKEKGVTALD-PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPEL-IKPPKILVI 181
             +      D P +   +L+   ++ +K+G PV  P Y+  +     P L + P  +++I
Sbjct: 83  LAKVHEYNFDHPDSFHTELLLSCMEKLKQGQPVIIPSYDFKSHKSTGPGLKVNPSDVIII 142

Query: 182 EGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEAR--KPDF 239
           EG+  ++D RVRDL++  I++D  ++++ A +IQRD  ERG +++++     AR  KP F
Sbjct: 143 EGILVLHDPRVRDLMNMKIFVDTDSDLRLARRIQRDTVERGRNIQNVLDQY-ARFVKPSF 201

Query: 240 DAYIDPQKQYADAVI 254
           + +I P K++AD +I
Sbjct: 202 EEFILPSKKHADIII 216


>30154.m001150 uridine cytidine kinase I, putative
          Length = 482

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLD--PPELIKPPKILVIEGLHPMYDQR 191
           P A D + +   ++ ++ G  V+ P Y+  +   D  P   + P  ++++EG+   +DQR
Sbjct: 105 PDAFDTEQLLCAMEKLRHGQAVDIPNYDFKSYKNDVFPARRVNPSDVIILEGILVFHDQR 164

Query: 192 VRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYA 250
           VRDL++  I++D   +V+ A +I+RD AE+G  + ++        KP FD +I P K+YA
Sbjct: 165 VRDLMNMKIFVDTDADVRLARRIRRDTAEKGRDIGAVLDQYSKFVKPAFDDFILPTKKYA 224

Query: 251 DAVI 254
           D +I
Sbjct: 225 DIII 228


>30190.m010949 Uracil phosphoribosyltransferase, putative
          Length = 481

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLL--DPPELIKPPKILVIEGLHPMYDQR 191
           P A D + + + ++ ++ G P + PIY+  +     D    +    ++++EG+   +DQR
Sbjct: 117 PDAFDTEQLLDCIQTLRSGQPYQVPIYDFKSHRRSSDCFRQVNASDVIILEGILVFHDQR 176

Query: 192 VRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESI-KASIEARKPDFDAYIDPQKQYA 250
           VR L++  I++D   +V+ A +I+RD  ERG  + S+ +   +  KP FD ++ P K++A
Sbjct: 177 VRSLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKFA 236

Query: 251 DAVI 254
           D +I
Sbjct: 237 DVII 240


>30138.m003855 uridine cytidine kinase I, putative
          Length = 657

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 31/193 (16%)

Query: 63  VVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRT 122
           +++GLA  SG GK+ F  ++       A                   VI +D+Y+   R 
Sbjct: 66  ILVGLAGPSGAGKTVFTEKVLHFMPSVA-------------------VISMDNYNDSSRI 106

Query: 123 --GRKEKGVTALDPRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPP--KI 178
             G  +      DPR  D+D + + V+ +K G  VE PIY+  +        ++ P  +I
Sbjct: 107 VDGNFD------DPRLTDYDTLLKNVQDLKSGKAVEVPIYDFKSSSRIGYRTLEVPTSRI 160

Query: 179 LVIEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASI-EARKP 237
           ++IEG++ +  +++R +LD  + +          ++ RD+   G + E I   I E   P
Sbjct: 161 VIIEGIYAL-SEKLRPMLDLRVSVTGGVHFDLVKRVLRDIQRAGQAPEEIIQQISETVYP 219

Query: 238 DFDAYIDPQKQYA 250
            + A+I+P  Q A
Sbjct: 220 MYKAFIEPDLQTA 232


>30174.m009044 uridine cytidine kinase I, putative
          Length = 657

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)

Query: 63  VVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRT 122
           +++G+A  SG GK+ F  ++ +     A                   VI +D+Y+   R 
Sbjct: 67  ILVGVAGPSGAGKTVFTEKVFNFMPSIA-------------------VITMDNYNDASRI 107

Query: 123 --GRKEKGVTALDPRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPP--KI 178
             G  +      DPR  D+D + E +  +K G  V+ P+Y+  T        ++ P  +I
Sbjct: 108 IDGNFD------DPRLTDYDTLLENIHGLKAGKAVQVPLYDFKTSSRVGYRTVEVPASRI 161

Query: 179 LVIEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASI-EARKP 237
           ++IEG++ +  +R+R LLD  + +          ++ RD+   G   E I   I E   P
Sbjct: 162 VIIEGIYAL-SERLRPLLDLRVSITGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYP 220

Query: 238 DFDAYIDPQKQYA 250
            + A+I+P  + A
Sbjct: 221 MYKAFIEPDLRTA 233