Jatropha Genome Database

JcCB0059751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0059751.10 + phase: 0 /pseudo/partial
         (249 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30054.m000794 ribose-phosphate pyrophosphokinase, putative            370   e-103
30054.m000790 ribose-phosphate pyrophosphokinase, putative            344   3e-95
29709.m001223 ribose-phosphate pyrophosphokinase, putative            291   3e-79

>30054.m000794 ribose-phosphate pyrophosphokinase, putative
          Length = 351

 Score =  370 bits (949), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/271 (73%), Positives = 206/271 (76%), Gaps = 26/271 (9%)

Query: 1   VRGCDVYLLQPTCPSANENLMELLIMIDACRRASAKNITAVIPYFGYARV**K-D*RS*I 59
           VRGCDVYLLQPTCP ANENLMELLIMIDACRRASAK ITAVIPYFGYAR   K   R  I
Sbjct: 85  VRGCDVYLLQPTCPPANENLMELLIMIDACRRASAKTITAVIPYFGYARADRKTQGRESI 144

Query: 60  YCGQTCRKSYHRSWCKSRSCL*SSFRPVHGLF*YF--------C*PCVLP---------- 101
                          +  +C   S + +     YF        C P +L           
Sbjct: 145 AAKLVANLITEAGANRVLACDIHSGQSMG----YFDIPVDHVHCQPVILEYLASKAVRSN 200

Query: 102 ---VVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAEVMNLIGDVKGKVAVMVDDM 158
              VVSPDVGGVARARAFAKKLSDAPLAIVDKRR GHNVAEVMNLIGDVKGKVAVMVDDM
Sbjct: 201 ELVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDM 260

Query: 159 IDTAGTIAKGAALLHHEGAREVYACCTHAVFSPPAIERLSSGLFQEVIITNTIPVAEKNY 218
           IDTAGTIAKGA LL  EGAREVYACCTHAVFSPPAIERLSSGLFQEVIITN+IPVAEKNY
Sbjct: 261 IDTAGTIAKGAELLQQEGAREVYACCTHAVFSPPAIERLSSGLFQEVIITNSIPVAEKNY 320

Query: 219 FPQLTVLSVANLLGETIWRIHDDCSVSSIFQ 249
           FPQLTVLS+ANLLGETIWR+HDDCSVSSIFQ
Sbjct: 321 FPQLTVLSIANLLGETIWRVHDDCSVSSIFQ 351


>30054.m000790 ribose-phosphate pyrophosphokinase, putative
          Length = 395

 Score =  344 bits (882), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 189/276 (68%), Positives = 199/276 (72%), Gaps = 36/276 (13%)

Query: 1   VRGCDVYLLQPTCPSANENLMELLIMIDACRRASAKNITAVIPYFGYARV**KD*RS*IY 60
           VRGCDVYLLQPTCP ANENLMELLIMIDACRRASAK ITAVIPYFGYAR   K       
Sbjct: 129 VRGCDVYLLQPTCPPANENLMELLIMIDACRRASAKTITAVIPYFGYARADRK------- 181

Query: 61  CGQTCRKSYHRSWCKSRSCL*SSFR-----------------PV------HGLF*YFC*P 97
              +CR+S       +      + R                 PV      H +  Y    
Sbjct: 182 --TSCRESIAAKLVANLITEAGANRVLVCDIHSGQSLGYFDIPVDQAICEHVILEYITSK 239

Query: 98  CV----LPVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAEVMNLIGDVKGKVAV 153
            +    L VVSPDVGGVARAR+FAKKLSDAPLAIVDKRRQ HN+AEVMNLIGDVKGKVAV
Sbjct: 240 GIRSNELVVVSPDVGGVARARSFAKKLSDAPLAIVDKRRQEHNIAEVMNLIGDVKGKVAV 299

Query: 154 MVDDMIDTAGTIAKGAALLHHEGAREVYACCTHAVFSPPAIERLSSGLFQEVIITNTIPV 213
           M+DDMIDTAGTI KGA LLH EGAR VYACCTHAVFSPPAIERLSSG FQEVI+TNTIPV
Sbjct: 300 MLDDMIDTAGTITKGADLLHQEGARAVYACCTHAVFSPPAIERLSSGRFQEVIVTNTIPV 359

Query: 214 AEKNYFPQLTVLSVANLLGETIWRIHDDCSVSSIFQ 249
            EKNYFPQLTVLSVA LLGETIWRIH   SVSSI Q
Sbjct: 360 VEKNYFPQLTVLSVARLLGETIWRIHVGSSVSSISQ 395


>29709.m001223 ribose-phosphate pyrophosphokinase, putative
          Length = 374

 Score =  291 bits (744), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 141/149 (94%), Positives = 145/149 (97%)

Query: 100 LPVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAEVMNLIGDVKGKVAVMVDDMI 159
           L VVSPDVGGVARARAFAKKLSDAPLAIVDKRR GHNVAEVMNLIGDVKGKVAVMVDDMI
Sbjct: 225 LVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMI 284

Query: 160 DTAGTIAKGAALLHHEGAREVYACCTHAVFSPPAIERLSSGLFQEVIITNTIPVAEKNYF 219
           DTAGTI+KGAALLH EGAREVYAC THAVFSPPAIERLSSGLFQEVIITNTIPVAE+NYF
Sbjct: 285 DTAGTISKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYF 344

Query: 220 PQLTVLSVANLLGETIWRIHDDCSVSSIF 248
           PQLT+LSVANLLGETIWR+HDDCSVSSIF
Sbjct: 345 PQLTILSVANLLGETIWRVHDDCSVSSIF 373