Jatropha Genome Database

JcCB0058711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058711.10 - phase: 0 
         (363 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27772.m000038 s-adenosylmethionine decarboxylase, putative            429   e-120
30138.m003848 s-adenosylmethionine decarboxylase, putative            335   3e-92
29673.m000902 s-adenosylmethionine decarboxylase, putative            313   5e-86
29726.m003938 s-adenosylmethionine decarboxylase, putative            225   3e-59

>27772.m000038 s-adenosylmethionine decarboxylase, putative
          Length = 301

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/309 (68%), Positives = 244/309 (78%), Gaps = 13/309 (4%)

Query: 1   MAVDSPSMSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIV 60
           MA+DSP    SPIGFEGFEKRLEI F EPPIFKDPTGRGLRAL+RSQLDSILEPACCTIV
Sbjct: 1   MAIDSPP--PSPIGFEGFEKRLEIAFQEPPIFKDPTGRGLRALSRSQLDSILEPACCTIV 58

Query: 61  TQLSNSEFDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSR 120
           +QLSN++FDSYVLSESSLFV+PFKIVLKTCGTT                      V YSR
Sbjct: 59  SQLSNNQFDSYVLSESSLFVYPFKIVLKTCGTTKLLLSIKPILSLADSLSVAVTHVQYSR 118

Query: 121 GSFIFPNYQPAPHRSFSEEVTALNEFFGHLKTEAYVLGGSSAPNWNWHIYSASSGSSQPL 180
           G+FIFPNYQPAPHRSFSEEVT LNEFF HL   AYV+G       +WHIYSAS   S+PL
Sbjct: 119 GTFIFPNYQPAPHRSFSEEVTTLNEFFSHLNPLAYVIG-------DWHIYSASQ--SEPL 169

Query: 181 MK-DHTDTLNVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDP 239
           M+ + TD   VEICMTGLEKKKAAVFFK S + +AS+MT+ SGI +I+PSH+ICDFDFDP
Sbjct: 170 MRGNRTDMATVEICMTGLEKKKAAVFFKSSGN-TASEMTKISGIRDIIPSHVICDFDFDP 228

Query: 240 CGYSMNGIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIA 299
           CGYSMNGI+G+ +STVHVTPEDGFSYASYE +GL+  ++KL  L+KRV+ CFGP +FS+A
Sbjct: 229 CGYSMNGIDGSGYSTVHVTPEDGFSYASYEALGLDYGEIKLNPLIKRVLKCFGPKQFSVA 288

Query: 300 VTCHGGADK 308
           VTC G  +K
Sbjct: 289 VTCRGXXEK 297


>30138.m003848 s-adenosylmethionine decarboxylase, putative
          Length = 361

 Score =  335 bits (858), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 183/339 (53%), Positives = 226/339 (66%), Gaps = 12/339 (3%)

Query: 8   MSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSE 67
           M+ S IGFEG+EKRLEI+F E  +F DP G+GLR+L+++QLD IL PA CTIV  LSN  
Sbjct: 6   MAVSAIGFEGYEKRLEISFFELGMFVDPEGKGLRSLSKAQLDMILGPAECTIVDSLSNEN 65

Query: 68  FDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPN 127
            DSYVLSESSLFV+P+KI++KTCGTT                      V Y+RGSFIFP 
Sbjct: 66  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLAIPPILKLADALSLNVKSVRYTRGSFIFPG 125

Query: 128 YQPAPHRSFSEEVTALNEFFGHLK--TEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHT 185
            Q  PHRSFSEEV  L+++FG L   + AYV+GG  +P   WH+YSAS+ S+      +T
Sbjct: 126 AQSYPHRSFSEEVAVLDDYFGKLGAGSTAYVMGGLHSPQ-KWHVYSASAHSTYCCDCVYT 184

Query: 186 DTLNVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYSMN 245
               +E+CMTGLE++KA+VFFK S   SA+ MT  SGI  ILP+  ICDFDFDPCGYSMN
Sbjct: 185 ----IEMCMTGLEREKASVFFK-SQSASAAVMTVDSGIRRILPNSKICDFDFDPCGYSMN 239

Query: 246 GIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIAVTCHGG 305
            IEG A ST+H+TPEDGFSYAS+E +G  P +V L  LV+RV+ CF PS+FSIAV  +  
Sbjct: 240 AIEGAAISTIHITPEDGFSYASFETVGYNPEEVNLNQLVERVLACFQPSQFSIAVHAN-V 298

Query: 306 ADKWWPNECD-DVDGYSRRSMVEQELVSGGGRVVVYMTY 343
           ADK     C  DV GY R     +EL  GG   +VY  +
Sbjct: 299 ADKQLVQTCALDVKGYCRGERSFEELGMGGS--IVYQKF 335


>29673.m000902 s-adenosylmethionine decarboxylase, putative
          Length = 359

 Score =  313 bits (803), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 177/362 (48%), Positives = 232/362 (64%), Gaps = 23/362 (6%)

Query: 7   SMSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNS 66
           ++S  PIGFEG+EKRLE++F+EP  F DP G GLR+L++SQLD IL+PA CTIV  LSN 
Sbjct: 2   ALSVPPIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKSQLDEILKPAECTIVDSLSND 61

Query: 67  EFDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFP 126
             DSYVLSESSLFV+P+K+++KTCGTT                      V Y+RGSFIFP
Sbjct: 62  HVDSYVLSESSLFVYPYKLMIKTCGTTKLLLSIPAILKLADTLSLSVSSVRYTRGSFIFP 121

Query: 127 NYQPAPHRSFSEEVTALNEFFGHLKTE--AYVLGGSSAPNWNWHIYSASSGSSQPLMKDH 184
           + Q  PHRSFSEEV  L+  FG L  E  AYV+ GS      WH YSA+        + H
Sbjct: 122 SAQTFPHRSFSEEVAVLDGHFGKLGLESVAYVM-GSPDETRKWHAYSAAIDE-----RCH 175

Query: 185 TDTL-NVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYS 243
           +  +  +E+CMTGL++++A+VF+K     SA+ MT  SGI +ILP   ICDFDFDPCGYS
Sbjct: 176 SSPIYTLEMCMTGLDRERASVFYKTHTS-SAAVMTEDSGIRKILPQSEICDFDFDPCGYS 234

Query: 244 MNGIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIAVTCH 303
           MN +EG A ST+H+TPEDGFSYAS+E MG    +V LT L++RV+ CF P+EFSIA+  +
Sbjct: 235 MNAVEGDAISTIHITPEDGFSYASFESMGYNFEEVNLTQLLERVLACFEPTEFSIALHSN 294

Query: 304 GGAD--KWWPNECDDVDGYSRRSMVEQELVSGGGRVVVYMTYEMKDKGRLVVPASAKVSM 361
              D  K++P    DV GYS      + L  GG   ++Y ++E     R+   AS +  +
Sbjct: 295 IVHDELKFFP----DVKGYSCGGRNYEVLGKGGS--IIYYSFE-----RIKGCASPRSIL 343

Query: 362 QC 363
           +C
Sbjct: 344 KC 345


>29726.m003938 s-adenosylmethionine decarboxylase, putative
          Length = 342

 Score =  225 bits (573), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/346 (39%), Positives = 192/346 (55%), Gaps = 19/346 (5%)

Query: 14  GFEGFEKRLEITF-NEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSEFDSYV 72
           GFEGFEKRLE+ F  + P+  D    GLR L    L ++L    CT+V+ + N  FD+YV
Sbjct: 5   GFEGFEKRLELHFFGDDPVMVD--NMGLRLLEFESLVNVLNAVQCTVVSAVGNQYFDAYV 62

Query: 73  LSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPNYQPAP 132
           LSESSLFV+P KI++KTCGTT                        Y+RG+FIFP  QP P
Sbjct: 63  LSESSLFVYPTKIIIKTCGTTQLLKSIRPLLHYACNLGLSLCSCRYTRGNFIFPKSQPFP 122

Query: 133 HRSFSEEVTALNEFF-GHLKTEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHTDTLNVE 191
           H SF EEV  L E    +L      +  S   + +WH+++AS  +       H  T  +E
Sbjct: 123 HTSFKEEVIYLEETLPSNLCYRKASVMPSKMTSHSWHVFTASDQNHFISQNHHLYT--IE 180

Query: 192 ICMTGLEKKKAAVFFK-----RSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYSMNG 246
           +CMT L++  A  FF+     ++ D +  +MT+ +GI +I P  +ICDF FDPCGYSMNG
Sbjct: 181 VCMTELDRVLARKFFQPAGDGKNGDVAGKEMTKLTGIGDINPGAIICDFAFDPCGYSMNG 240

Query: 247 IEGTAFSTVHVTPEDGFSYASYEVMG--LEPSQVKLTTLVKRVVNCFGPSEFSIAVTCHG 304
           I+   +ST+HVTPEDG+SYAS+E +G   + S   +  ++K+VV  F P+  S++ TC+ 
Sbjct: 241 IDSDRYSTIHVTPEDGYSYASFECVGSIFDDSDDDVAEVLKKVVQVFRPATMSVSTTCN- 299

Query: 305 GADKWWPNECDDVD--GYSRRSMVEQELVSGGGRVVVYMTYEMKDK 348
            + + W      +D  G   RS    E  + G   VV+ T+  + K
Sbjct: 300 -SHEVWTRVAHSLDPLGMKCRSCTVDEFPATGS--VVFQTFTARRK 342