Jatropha Genome Database

JcCB0058331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058331.10 + phase: 0 /partial
         (91 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29585.m000579 methionine-tRNA synthetase, putative                    156   2e-39

>29585.m000579 methionine-tRNA synthetase, putative
          Length = 523

 Score =  156 bits (394), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 80/91 (87%)

Query: 1   MRIIAIALSPVAPSLSWRIYAQLGYSQDHFNSITWSETKWGGLKGGQVMAQPKPVFARIE 60
           MRIIAIALSPV+PSL WRIYAQLGYS+DHFN++TWSETKWGGLKGGQVMAQPKPVFARIE
Sbjct: 433 MRIIAIALSPVSPSLCWRIYAQLGYSKDHFNTLTWSETKWGGLKGGQVMAQPKPVFARIE 492

Query: 61  NKTETEDGEATSXXXXXXXXXXPRAQVVAEA 91
           NKTETEDGEA++          P+A+VVAEA
Sbjct: 493 NKTETEDGEASAKKIVNRKDTKPQAKVVAEA 523