Jatropha Genome Database

JcCB0058191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058191.20 - phase: 0 /partial/short
         (49 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29904.m002966 glutathione reductase, putative                          94   2e-20
29883.m001999 glutathione reductase, putative                          65   8e-12

>29904.m002966 glutathione reductase, putative
          Length = 496

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 47/49 (95%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRVTAGNKPKTNL 49
           G+AVA+K GATKAQFDSTVGIHPSAAEEFVTMRSL+RRV AGNKPKTNL
Sbjct: 448 GMAVALKCGATKAQFDSTVGIHPSAAEEFVTMRSLTRRVNAGNKPKTNL 496


>29883.m001999 glutathione reductase, putative
          Length = 560

 Score = 64.7 bits (156), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 36/41 (87%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRVTA 41
           G AVAIK+G TKA FD+TVGIHPSAAEEFVTMR+ +R++ A
Sbjct: 502 GFAVAIKAGLTKADFDATVGIHPSAAEEFVTMRTPTRKIRA 542