Jatropha Genome Database

JcCB0057761.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0057761.30 - phase: 0 
         (71 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m004099 conserved hypothetical protein                          122   5e-29

>29726.m004099 conserved hypothetical protein
          Length = 221

 Score =  122 bits (305), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 62/71 (87%)

Query: 1   MEKGRQVMEEFFDIWQEAISKRSLPGHFMHIEPNFAEYGLLDQYSSQHTAVQYATVVAQL 60
           +EK R +MEEF DIWQEAISKRSLPG FMHIE NFA+YGL D Y+ QHTA+QYATV+AQL
Sbjct: 151 IEKARPIMEEFVDIWQEAISKRSLPGQFMHIETNFADYGLFDHYTPQHTALQYATVIAQL 210

Query: 61  IATQSVQATRN 71
           IATQ+VQA RN
Sbjct: 211 IATQTVQAARN 221