Jatropha Genome Database

JcCB0056041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0056041.10 + phase: 1 /partial
         (318 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013651 branched-chain amino acid aminotransferase, putative    474   e-134
29825.m000321 branched-chain amino acid aminotransferase, putative    409   e-115
30170.m013653 branched-chain amino acid aminotransferase, putative    369   e-102
30099.m001645 branched-chain amino acid aminotransferase, putative    314   3e-86
30099.m001646 branched-chain amino acid aminotransferase, putative    140   1e-33
30170.m013652 branched-chain amino acid aminotransferase, putative    112   3e-25
30099.m001647 branched-chain amino acid aminotransferase, putative     83   2e-16
30415.m000024 branched-chain amino acid aminotransferase, putative     62   4e-10
30128.m008736 branched-chain amino acid aminotransferase, putative     59   4e-09

>30170.m013651 branched-chain amino acid aminotransferase, putative
          Length = 440

 Score =  474 bits (1221), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/322 (72%), Positives = 265/322 (82%), Gaps = 10/322 (3%)

Query: 1   MITRITTFATTLKVTPSDTQSKTSELGNDVSSLSWD--NLGFDHVPTDYMFVMKCC-GGD 57
           M+TR+T     ++ TPSDTQS+TSEL ND+    WD  +LGFD VPTD+M+VMKCC GGD
Sbjct: 74  MVTRLTV---RIRATPSDTQSRTSELANDIR---WDKDDLGFDTVPTDFMYVMKCCEGGD 127

Query: 58  KFSDGELKTFGEIELNPFSSVLNYGQGIIENMKAYKK-DDGSILLFRPEANALRMTMGAD 116
           KFSDGEL  + +IELNPFSSVLNYGQGIIE++KA+KK DD +ILLFRPEAN LRM +GAD
Sbjct: 128 KFSDGELLLYEKIELNPFSSVLNYGQGIIEDLKAFKKEDDSTILLFRPEANGLRMRVGAD 187

Query: 117 RMCMPAPTFDQFLEAVKVTVSANRRWIPPPNKGFLHIRPLLIGSGPVLILTPSPEFTFLI 176
           R+CMP+PT  QF+EAVK+T SANRRW+PP NKGFLHIRPLLIGSG VL L PS EF FLI
Sbjct: 188 RLCMPSPTIHQFVEAVKLTASANRRWVPPQNKGFLHIRPLLIGSGNVLSLIPSTEFIFLI 247

Query: 177 YVTPVRNYFESGVEPINLVVEKEAHRAVPGGVGSIKAIGNYAMIVXXXXXXXXNGFHGVL 236
           YV PV NYFESG EPINLVVE   HRAVPGGVGS KAIGNYAM+         NG+H VL
Sbjct: 248 YVNPVTNYFESGEEPINLVVENVIHRAVPGGVGSTKAIGNYAMVAKAQAAAKANGYHDVL 307

Query: 237 YLDAVHNKYLEEVSAANIFVVKDKTICTPALRGTILPGITRESVIDIARNLRFQVEEGRV 296
           YLDAVHNKYLE+++ ANIF+VKDKTICTPALRGTILPGITRES+IDIAR   FQVEE  V
Sbjct: 308 YLDAVHNKYLEQITTANIFLVKDKTICTPALRGTILPGITRESIIDIARGQGFQVEERLV 367

Query: 297 SVEELFNADEVFCTGTAVGLLP 318
           SVEELF+ADEVFCTG  +GL P
Sbjct: 368 SVEELFSADEVFCTGNTIGLFP 389


>29825.m000321 branched-chain amino acid aminotransferase, putative
          Length = 417

 Score =  409 bits (1051), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 193/303 (63%), Positives = 238/303 (78%), Gaps = 5/303 (1%)

Query: 17  SDTQ-SKTSELGNDVSSLSWDNLGFDHVPTDYMFVMKCCGGDKFSDGELKTFGEIELNPF 75
           SDT  S+T+EL +    + WDNLGF +VPTDYM++MKC     FS G L+ FG IEL+P 
Sbjct: 71  SDTYGSQTTELAD----IDWDNLGFAYVPTDYMYIMKCVRDGSFSSGGLQRFGNIELSPS 126

Query: 76  SSVLNYGQGIIENMKAYKKDDGSILLFRPEANALRMTMGADRMCMPAPTFDQFLEAVKVT 135
           + VLNYGQG+ E +KAY+K+DG+ILLFRPE NALRM +GA+RMCMP+PT +QF+EAVK T
Sbjct: 127 AGVLNYGQGLFEGLKAYRKEDGNILLFRPEENALRMKIGAERMCMPSPTVEQFVEAVKAT 186

Query: 136 VSANRRWIPPPNKGFLHIRPLLIGSGPVLILTPSPEFTFLIYVTPVRNYFESGVEPINLV 195
           V AN+RW+PPP KG L+IRPLL+GSG VL L P+PE+TFLIYV+PV NYF+ GV  INL+
Sbjct: 187 VLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAAINLI 246

Query: 196 VEKEAHRAVPGGVGSIKAIGNYAMIVXXXXXXXXNGFHGVLYLDAVHNKYLEEVSAANIF 255
           VE E HRA PGG GS+K IGNYA ++         G+  VLYLD VH KYLEEVS+ NIF
Sbjct: 247 VEHELHRATPGGTGSVKTIGNYAAVLKAQSVAKAKGYSDVLYLDCVHKKYLEEVSSCNIF 306

Query: 256 VVKDKTICTPALRGTILPGITRESVIDIARNLRFQVEEGRVSVEELFNADEVFCTGTAVG 315
           +VKDK I TPA++GTILPGITR+S+ID+AR+  FQVEE  V+V+EL +ADEVFCTGTAV 
Sbjct: 307 IVKDKVISTPAVKGTILPGITRKSIIDVARSQGFQVEERPVAVDELLDADEVFCTGTAVV 366

Query: 316 LLP 318
           + P
Sbjct: 367 VSP 369


>30170.m013653 branched-chain amino acid aminotransferase, putative
          Length = 399

 Score =  369 bits (946), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 168/296 (56%), Positives = 219/296 (73%)

Query: 23  TSELGNDVSSLSWDNLGFDHVPTDYMFVMKCCGGDKFSDGELKTFGEIELNPFSSVLNYG 82
           +S+  ++ ++L WDNLGF   PTDYM++MKC     F  G+L  +G +EL+P + VLNYG
Sbjct: 57  SSDGEDEYANLDWDNLGFGVTPTDYMYLMKCAKDGSFVQGQLSRYGNLELSPSAGVLNYG 116

Query: 83  QGIIENMKAYKKDDGSILLFRPEANALRMTMGADRMCMPAPTFDQFLEAVKVTVSANRRW 142
           QG+ E  KAY+K+DG +LLFRP+ NA+RM MGADRMCMP P+ DQF++AVK    +N+RW
Sbjct: 117 QGLYEGTKAYRKEDGRLLLFRPDQNAIRMQMGADRMCMPCPSIDQFVDAVKQVAFSNKRW 176

Query: 143 IPPPNKGFLHIRPLLIGSGPVLILTPSPEFTFLIYVTPVRNYFESGVEPINLVVEKEAHR 202
           +PPP KG L+IRPLL+GSGPVL L P+PE+TFL+Y +PV NYF+ G  P+NL +E+E HR
Sbjct: 177 VPPPGKGTLYIRPLLMGSGPVLGLAPAPEYTFLVYASPVGNYFKEGSAPLNLYIEEEFHR 236

Query: 203 AVPGGVGSIKAIGNYAMIVXXXXXXXXNGFHGVLYLDAVHNKYLEEVSAANIFVVKDKTI 262
           A  GG G +K+I NYA ++         GF  VLYLDAV+ KYLEEVS+ NIFVVK   I
Sbjct: 237 ASRGGAGGVKSITNYAPVLKAIARAKGRGFSDVLYLDAVNKKYLEEVSSCNIFVVKGNVI 296

Query: 263 CTPALRGTILPGITRESVIDIARNLRFQVEEGRVSVEELFNADEVFCTGTAVGLLP 318
            +P   GTIL G+TR S+I+IA +L +QVEE  + V+EL +ADEVFCTGTAVG+ P
Sbjct: 297 SSPPANGTILQGVTRRSIIEIACDLNYQVEERAIPVDELMDADEVFCTGTAVGVAP 352


>30099.m001645 branched-chain amino acid aminotransferase, putative
          Length = 328

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 150/278 (53%), Positives = 197/278 (70%), Gaps = 5/278 (1%)

Query: 43  VPTDYMFVMKCCGGDKFS--DGELKTFGEIELNPFSSVLNYGQGIIENMKAYKKDDGSIL 100
           +PTDYM++M C   +KF+   G L  +G IEL+P S +LNYGQG+ E +KAY+ +D  I 
Sbjct: 7   IPTDYMYIMSCSDDEKFAFGQGNLTPYGNIELSPSSGILNYGQGLFEGLKAYRGEDNHIR 66

Query: 101 LFRPEANALRMTMGADRMCMPAPTFDQFLEAVKVTVSANRRWIPPPNKGFLHIRPLLIGS 160
           LFRPE NALRM MGA+RMCMP PT +QF +AVK    AN+RWIPP  KG L+IRPLL+G+
Sbjct: 67  LFRPEENALRMQMGAERMCMPCPTVEQFADAVKQIALANKRWIPPVGKGSLYIRPLLMGT 126

Query: 161 GPVLILTPSPEFTFLIYVTPVRNYFESGVEPINLVVEKEAHRAVPGGVGSIKAIGNYAMI 220
           GP+L + P+PE+TFL+Y +PV NY +    P++ +VE+  HRA+PGG G IKAI NY+ +
Sbjct: 127 GPILGVGPAPEYTFLLYASPVGNYSKG---PLHFLVEENVHRAIPGGTGGIKAITNYSPV 183

Query: 221 VXXXXXXXXNGFHGVLYLDAVHNKYLEEVSAANIFVVKDKTICTPALRGTILPGITRESV 280
                     GF  VL+LDA   K +EE +A NIFVVK   I TPA+ GTILPG+TR S+
Sbjct: 184 YKASTQAKAKGFSDVLFLDAEGGKNIEEGTACNIFVVKGNMIATPAVTGTILPGVTRRSI 243

Query: 281 IDIARNLRFQVEEGRVSVEELFNADEVFCTGTAVGLLP 318
           I+IA +  +Q+EE  V +EEL +ADE FCTGTA+ + P
Sbjct: 244 IEIALDFAYQIEERLVPLEELIDADEAFCTGTAMVVKP 281


>30099.m001646 branched-chain amino acid aminotransferase, putative
          Length = 213

 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 22/182 (12%)

Query: 141 RWI--PPPNKGFLHIRPLLIGSGPVLILTPSPEFTFLIYVTPVRNYFESGVEPINLVVEK 198
           RW   PP  KG L++RPLL GSG VL + P+PE TF++Y +P+  ++E  V+ +NL +EK
Sbjct: 3   RWQQGPPHGKGTLYLRPLLFGSGSVLAIGPAPETTFVVYASPIGTFYE--VKCMNLYIEK 60

Query: 199 EAHRAVPGGVGSIKAIGNYAMIVXXXXXXXXNGFHGVLYLDAVHNK--YLEEVSAANIFV 256
              R  PGG G I +I NY  +          GF  +L+LDA   K  Y++         
Sbjct: 61  RVFRPSPGGTGGINSITNYGPVFEAVKQAKAEGFDDLLFLDAATGKGFYMQYFH------ 114

Query: 257 VKDKTICTPALRGTILPGITRESVIDIARNLRFQVEEGRVSVEELFNADEVFCTGTAVGL 316
                     + GTILPGITR+S++DIAR+  +QV+E  + VE++ +ADEVFCTGTA+ +
Sbjct: 115 ----------IEGTILPGITRKSMMDIARDFGYQVQERLIPVEDVLDADEVFCTGTAMIV 164

Query: 317 LP 318
            P
Sbjct: 165 TP 166


>30170.m013652 branched-chain amino acid aminotransferase, putative
          Length = 108

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 2/95 (2%)

Query: 51  MKCCGGDKFSDGELKTFGEIELNPFSSVLNYGQGIIENM--KAYKKDDGSILLFRPEANA 108
           MK     +F  G+L  +G IEL+P S +LNYGQ    +   KAY+K+DG +LLFRP+ NA
Sbjct: 1   MKSSKEGQFEQGQLHRYGNIELSPSSGILNYGQASTTSFRTKAYRKEDGGLLLFRPDQNA 60

Query: 109 LRMTMGADRMCMPAPTFDQFLEAVKVTVSANRRWI 143
            RM +GA+RMCMP+P+ +QF++AVK T  AN+RW+
Sbjct: 61  TRMKIGAERMCMPSPSIEQFVDAVKQTAIANKRWV 95


>30099.m001647 branched-chain amino acid aminotransferase, putative
          Length = 99

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 5/99 (5%)

Query: 45  TDYMFVMKCCGGDKFS--DGELKTFGEIELNPFSSVLNYGQGIIENMKAYKKDDGSILLF 102
           TD+MF+MKC  G  F+     L   G++  + +SS L    G+IE +KA +++ G I+LF
Sbjct: 4   TDFMFIMKCPVGQVFTGQSPSLCKHGDMS-SCWSSKL--WTGLIEGLKACRREGGRIMLF 60

Query: 103 RPEANALRMTMGADRMCMPAPTFDQFLEAVKVTVSANRR 141
           RPE NAL + MGA+R+CM AP+  QF+ AVK     NRR
Sbjct: 61  RPEENALSLQMGAERLCMAAPSVQQFVYAVKQIALVNRR 99


>30415.m000024 branched-chain amino acid aminotransferase, putative
          Length = 228

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 2/81 (2%)

Query: 231 GFHGVLYLDAVHNKYLEEVSAANIFVVKDKTICTPALRGTILPGITRESVIDIARNLRFQ 290
           GF+  L  D   N  + E +++N+F+VKD  + TP    T L GITR  VI + R   F 
Sbjct: 109 GFNNALVRD--MNGNVVETASSNVFMVKDGIVYTPVANRTFLAGITRARVISLLRQEGFD 166

Query: 291 VEEGRVSVEELFNADEVFCTG 311
           V E  +SVE+   ADE+F TG
Sbjct: 167 VREETLSVEQFMTADEIFTTG 187


>30128.m008736 branched-chain amino acid aminotransferase, putative
          Length = 378

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 27/252 (10%)

Query: 75  FSSVLNYGQGIIENMKAYKKDDGSILLFRPEANALRMTMGADRMCMP-APTFDQFLEAVK 133
           F SV+  G  + E ++ Y   +G I  F+ E +  R+   A  +     PT ++  EA+ 
Sbjct: 104 FDSVVQGGDSVWEGLRVY---NGKI--FKLEEHLDRLFDSAKALAFKNVPTREEVKEAIF 158

Query: 134 VTVSANRRWIPPPNKGFL---HIRPLLIGSGPVLILTPSPEFTF----LIYVTPVRNYFE 186
            T+  N         G     HIR L +  G  +    SP F      LI +   +    
Sbjct: 159 RTLVTN---------GMFDNAHIR-LSLTRGKKVTSGMSPAFNLYGCTLIVLPEWKPPVY 208

Query: 187 SGVEPINLVVEKEAHRAVPGGVGSIKAIGNYAMIVXXXXXXXXNGFHGVLYLDAVHNKYL 246
                INLV      R  P  + S     N    +              + LD   + Y+
Sbjct: 209 DNTHGINLVTAT-TRRNSPNNLDSKIHHNNLLNNILAKIEGNNANADDAIMLDK--DGYV 265

Query: 247 EEVSAANIFVVKDKTICTPALRGTILPGITRESVIDIARNLRFQVEEGRVSVEELFNADE 306
            E +A NIF+VK   + TP      LPGITR +V+D+       +EE ++S+ E   ADE
Sbjct: 266 SETNATNIFLVKKGRVSTPHA-DYCLPGITRATVMDLVIKENLVLEERKISLSEFHTADE 324

Query: 307 VFCTGTAVGLLP 318
            + TGT   L P
Sbjct: 325 AWTTGTMGELSP 336