Jatropha Genome Database

JcCB0055861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0055861.10 - phase: 0 
         (62 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m005982 mads box protein, putative                               90   3e-19
30170.m013776 mads box protein, putative                               86   5e-18
29838.m001690 mads box protein, putative                               81   9e-17
30138.m003939 mads box protein, putative                               77   1e-15
30174.m008934 mads box protein, putative                               77   2e-15
29907.m000663 mads box protein, putative                               75   7e-15
29782.m000119 Floral homeotic protein DEFICIENS, putative              74   2e-14
29813.m001508 mads box protein, putative                               74   2e-14
30221.m002218 mads box protein, putative                               73   3e-14
30138.m004061 mads box protein, putative                               73   4e-14
29596.m000699 mads box protein, putative                               71   1e-13
29693.m002042 mads box protein, putative                               71   1e-13
29804.m001536 mads box protein, putative                               70   2e-13
29613.m000367 mads box protein, putative                               70   2e-13
29693.m002039 mads box protein, putative                               69   3e-13
29648.m001978 mads box protein, putative                               69   3e-13
28348.m000077 mads box protein, putative                               69   4e-13
30099.m001671 mads box protein, putative                               68   8e-13
30147.m014133 mads box protein, putative                               67   2e-12
30099.m001672 mads box protein, putative                               66   4e-12
29693.m002041 mads box protein, putative                               66   4e-12
28830.m000229 mads box protein, putative                               65   7e-12
29739.m003627 mads box protein, putative                               64   1e-11
27866.m000233 mads box protein, putative                               60   3e-10
29838.m001672 mads box protein, putative                               59   5e-10
29912.m005524 mads box protein, putative                               54   2e-08
30190.m010925 conserved hypothetical protein                           53   3e-08
27893.m000228 mads box protein, putative                               49   7e-07
28180.m000391 mads box protein, putative                               47   2e-06

>29908.m005982 mads box protein, putative
          Length = 347

 Score = 89.7 bits (221), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 53/62 (85%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLYEGK 60
          MGR K+ +K+IEN T R +TF+KR++G+IKKAYELS LCDI+IALI+FSP+G+L  + G+
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFSGR 60

Query: 61 KR 62
          KR
Sbjct: 61 KR 62


>30170.m013776 mads box protein, putative
          Length = 230

 Score = 85.5 bits (210), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/61 (60%), Positives = 52/61 (85%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLYEGK 60
          MGR K+ +K+IEN T R +TF+KR++G+IKKAYELS LCD+++ALI+FSP+G+L L+ G 
Sbjct: 1  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLFSGI 60

Query: 61 K 61
          K
Sbjct: 61 K 61


>29838.m001690 mads box protein, putative
          Length = 61

 Score = 81.3 bits (199), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 46/61 (75%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLYEGK 60
          M R KI +KKI+N T R +TF+KR+ G+ KKAYELSTLCD EIAL+VFS  GKLF Y   
Sbjct: 1  MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEYASS 60

Query: 61 K 61
          +
Sbjct: 61 R 61


>30138.m003939 mads box protein, putative
          Length = 244

 Score = 77.4 bits (189), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 46/57 (80%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          MGR ++ LK+IEN   R +TF+KR++G++KKA+E+S LCD E+ALIVFS  GKLF Y
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57


>30174.m008934 mads box protein, putative
          Length = 244

 Score = 76.6 bits (187), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/57 (57%), Positives = 46/57 (80%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          MGR ++ LK+IEN   R +TF+KR++G++KKAYELS LCD E+ALI+FS  GKL+ +
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF 57


>29907.m000663 mads box protein, putative
          Length = 205

 Score = 75.1 bits (183), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 42/55 (76%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLF 55
          M R K+ +K+IENP +R +TF KR+SG++KKA ELS LCD EI L +FS  GKL+
Sbjct: 1  MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLY 55


>29782.m000119 Floral homeotic protein DEFICIENS, putative
          Length = 235

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 45/55 (81%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLF 55
          MGR KI +KKIENPT R +T++KR++GI KKA EL+ LCD +++LI+FS +G+ F
Sbjct: 1  MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKF 55


>29813.m001508 mads box protein, putative
          Length = 360

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 45/61 (73%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLYEGK 60
          MGR K+ +KK+EN   R  T+ KRK GIIKKA ELS LCDI+I L++FSP GK  + +GK
Sbjct: 1  MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGKPSICKGK 60

Query: 61 K 61
          +
Sbjct: 61 R 61


>30221.m002218 mads box protein, putative
          Length = 233

 Score = 72.8 bits (177), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/57 (56%), Positives = 44/57 (77%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          MGR KI +K+IEN T R +TF+KR++G++KK +ELS LCD +I LI+FS  GK+  Y
Sbjct: 1  MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQY 57


>30138.m004061 mads box protein, putative
          Length = 363

 Score = 72.8 bits (177), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/59 (52%), Positives = 46/59 (77%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLYEG 59
          MGR K+ +K++E+ + R +T++KR++GI+KKA ELS LCDI I L++FSP GK  L+ G
Sbjct: 1  MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGKPTLFHG 59


>29596.m000699 mads box protein, putative
          Length = 262

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 45/55 (81%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLF 55
          MGR KI++++I+N T R +TF+KR++G++KKA EL+ LCD E+ +++FS  GKL+
Sbjct: 1  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLY 55


>29693.m002042 mads box protein, putative
          Length = 220

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/56 (60%), Positives = 42/56 (75%)

Query: 2  GRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          GR KI +K+IEN   R ITF+KR+SGI KKA EL TLC  E+ ++VFSPAGK F +
Sbjct: 9  GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSF 64


>29804.m001536 mads box protein, putative
          Length = 266

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 45/57 (78%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          MGR KI++++I+N T R +TF+KR++G++KKA ELS LCD E+ +I+FS   KL+ Y
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDY 84


>29613.m000367 mads box protein, putative
          Length = 183

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 44/57 (77%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          +GR KI ++KI   ++  +TF+KR++G+ KKA EL TLC +EIA+IVFSPAGK F +
Sbjct: 6  LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSF 62


>29693.m002039 mads box protein, putative
          Length = 172

 Score = 69.3 bits (168), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 44/57 (77%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          MGR KI +K +++ + R +TF+KR++G+ KKA EL+TLC  +IA++VFSP GK F +
Sbjct: 1  MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSF 57


>29648.m001978 mads box protein, putative
          Length = 234

 Score = 69.3 bits (168), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 46/57 (80%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          MGR +I +K+IEN + R +T++KR++GIIKKA E++ LCD E++LI+F+ +GK+  Y
Sbjct: 1  MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEY 57


>28348.m000077 mads box protein, putative
          Length = 215

 Score = 69.3 bits (168), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/54 (61%), Positives = 42/54 (77%)

Query: 2  GRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLF 55
          GR KI +KK+EN   R++TF+KRK GI KKA ELSTLC  EIA+++FS  GK+F
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVF 70


>30099.m001671 mads box protein, putative
          Length = 226

 Score = 68.2 bits (165), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 43/57 (75%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          +GR KI ++KI   T+  +TF+KR++G+ KKA EL TLC +EIA++VFSPA K F +
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSF 82


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 66.6 bits (161), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/54 (57%), Positives = 44/54 (81%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKL 54
          M R KI +++IEN T R +TF+KR++G++KKAYELS LCD E+A+I+FS  G+L
Sbjct: 1  MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRL 54


>30099.m001672 mads box protein, putative
          Length = 217

 Score = 65.9 bits (159), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 41/56 (73%)

Query: 2  GRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          GR KI + K+ N +   +TF+KR+SG+ KKA ELSTLC  EIA+IVFSP  K+F +
Sbjct: 7  GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSF 62


>29693.m002041 mads box protein, putative
          Length = 239

 Score = 65.9 bits (159), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/56 (60%), Positives = 41/56 (73%)

Query: 2  GRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          GR KI +KKIEN   R ITF+KR+SGI KKA EL TL   E+A +V+SPAGK F +
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSF 67


>28830.m000229 mads box protein, putative
          Length = 197

 Score = 65.1 bits (157), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          MGR K  +  I+  + R ++F+KR++GI KKA EL TLC +E A+++FSP GK F +
Sbjct: 1  MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTF 57


>29739.m003627 mads box protein, putative
          Length = 62

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 44/59 (74%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLYEG 59
          MGR K+ + ++E+   R + ++KRK G++KK  EL+TLCD+++ LI+FSP+GK  LY G
Sbjct: 1  MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGKPSLYVG 59


>27866.m000233 mads box protein, putative
          Length = 217

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 39/56 (69%)

Query: 2  GRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          GR KI +K IE  +   +TF+KR++G+ KKA ELS LC  ++A++ FSP  K+F +
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAF 68


>29838.m001672 mads box protein, putative
          Length = 207

 Score = 58.9 bits (141), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 2  GRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGKLFLY 57
          GR +I + KI   + R +TF+KR+ G+ KKA ELSTLC  EI++IVFSP  + F +
Sbjct: 8  GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSF 63


>29912.m005524 mads box protein, putative
          Length = 338

 Score = 53.5 bits (127), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 32/50 (64%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSP 50
          MGR K+ ++ I N   R IT+ KRK G+ KK  E   LCD++  +I+FSP
Sbjct: 1  MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFSP 50


>30190.m010925 conserved hypothetical protein
          Length = 386

 Score = 52.8 bits (125), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/53 (43%), Positives = 34/53 (64%)

Query: 1  MGRSKIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGK 53
          MG S+I ++ IE  + R +T+ KRK  ++KK  E S LC +E  LI+F+P  K
Sbjct: 1  MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHK 53


>27893.m000228 mads box protein, putative
          Length = 349

 Score = 48.5 bits (114), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 32/46 (69%)

Query: 8  LKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGK 53
          +KK+E+   R ++F KR++G+  KA EL  LCD ++A++V SP  K
Sbjct: 9  MKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSK 54


>28180.m000391 mads box protein, putative
          Length = 328

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 31/49 (63%)

Query: 5  KIILKKIENPTYRHITFAKRKSGIIKKAYELSTLCDIEIALIVFSPAGK 53
          K+ +KK E    R ++F KR+ G+  KA EL  LCD ++AL+V SP  +
Sbjct: 6  KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSPCSR 54