Jatropha Genome Database

JcCB0053361.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0053361.20 + phase: 0 /partial
         (169 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001223 ribose-phosphate pyrophosphokinase, putative            190   4e-49
30054.m000794 ribose-phosphate pyrophosphokinase, putative            189   8e-49
30054.m000790 ribose-phosphate pyrophosphokinase, putative            171   2e-43

>29709.m001223 ribose-phosphate pyrophosphokinase, putative
          Length = 374

 Score =  190 bits (482), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 103/158 (65%), Positives = 112/158 (70%), Gaps = 32/158 (20%)

Query: 17  FVTKQRRFPLRHGVRCNVVEPLNFDNGKP--CVPLLSPSAQSFPSFLASNTDLESCI--- 71
           F+ K+ RFPLRH VRCN+VEPL F+NGKP  CVPLLSP  QSFP+F+AS T LE      
Sbjct: 24  FIVKEPRFPLRHAVRCNLVEPLKFENGKPMPCVPLLSPIEQSFPNFIASKTHLEPKTTPR 83

Query: 72  ANKHYTRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLV 131
           A+KH TRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQE          
Sbjct: 84  ASKHDTRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQE---------- 133

Query: 132 QPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGY 169
                  +E+ M           ASAKNITAVIPYFGY
Sbjct: 134 ------VSEDAM-----------ASAKNITAVIPYFGY 154


>30054.m000794 ribose-phosphate pyrophosphokinase, putative
          Length = 351

 Score =  189 bits (479), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 92/128 (71%), Positives = 105/128 (82%), Gaps = 4/128 (3%)

Query: 42  NGKPCVPLLSPSAQSFPSFLASNTDLESCIANKHYTRLRIFSGTANPALSQEIACYMGLE 101
           NGKP  P ++   ++ P FL S    +S    +  T++++FSG+ANPALSQEIA  MGLE
Sbjct: 8   NGKPSSPTINE--RTLPKFLESALTEKSV--KRSSTKIKLFSGSANPALSQEIASNMGLE 63

Query: 102 LGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNIT 161
           LGK+ IKRFADGEIYVQLQESVRGCDVYL+QPTCPPANENLMELLIMIDACRRASAK IT
Sbjct: 64  LGKVNIKRFADGEIYVQLQESVRGCDVYLLQPTCPPANENLMELLIMIDACRRASAKTIT 123

Query: 162 AVIPYFGY 169
           AVIPYFGY
Sbjct: 124 AVIPYFGY 131


>30054.m000790 ribose-phosphate pyrophosphokinase, putative
          Length = 395

 Score =  171 bits (432), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/114 (71%), Positives = 97/114 (85%), Gaps = 2/114 (1%)

Query: 56  SFPSFLASNTDLESCIANKHYTRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEI 115
           + P FL S   +E+ + ++  + +++FSG+ANP+LSQEIA  +GLELG I  KRFADGEI
Sbjct: 64  TLPKFLES-AHMENSV-DRSVSGMKLFSGSANPSLSQEIASSLGLELGMINTKRFADGEI 121

Query: 116 YVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGY 169
           Y+QL+ESVRGCDVYL+QPTCPPANENLMELLIMIDACRRASAK ITAVIPYFGY
Sbjct: 122 YLQLKESVRGCDVYLLQPTCPPANENLMELLIMIDACRRASAKTITAVIPYFGY 175