Jatropha Genome Database

JcCB0053181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0053181.10 + phase: 0 /partial
         (490 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30179.m000578 adenosylmethionine-8-amino-7-oxononanoate aminotra...   356   1e-98
29980.m000178 adenosylmethionine-8-amino-7-oxononanoate aminotra...   244   5e-65
29980.m000177 adenosylmethionine-8-amino-7-oxononanoate aminotra...   192   3e-49
27879.m000012 adenosylmethionine-8-amino-7-oxononanoate aminotra...   192   3e-49
30179.m000579 hypothetical protein                                    186   2e-47
28446.m000003 hypothetical protein                                    171   8e-43
37380.m000003 hypothetical protein                                    108   8e-24
28707.m000042 adenosylmethionine-8-amino-7-oxononanoate aminotra...    79   7e-15

>30179.m000578 adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase, putative
          Length = 400

 Score =  356 bits (914), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 190/287 (66%), Positives = 215/287 (74%), Gaps = 18/287 (6%)

Query: 55  SASTSPPLQFPLNHPIYMIWGSNTSLGKTLVSTGLASSFLLSPPPAXXXXXXXXXXXFLY 114
           S S   PL FPL++P ++IWGSNTSLGKTL+STGLASSFLLS P             FLY
Sbjct: 29  STSDPSPLSFPLSYPTFLIWGSNTSLGKTLISTGLASSFLLSSPGTRK---------FLY 79

Query: 115 LKPVQTGFPSDSDSHFVFSKLSSLASRYNP-PFXXXXXXXXXXXXX-XXXXXFGGCFETN 172
           LKPVQTGFPSDSDSHF+F+KL SLASR    PF                       F+ N
Sbjct: 80  LKPVQTGFPSDSDSHFLFTKLHSLASRRTSLPFSLFSSNSVLKSSLPAAKSHLSLDFDAN 139

Query: 173 EFKY--GMYNLNFNEKKKVLRDEAG---VSELICETLYAWKEAVSPHLAAERENGVVEDS 227
           EFK+  GMY+LNF E+ K L ++ G    SELIC+TL+AW +AVSPHLAAERENGVVED+
Sbjct: 140 EFKFKFGMYDLNFREENKALSNDGGGADNSELICKTLFAWNDAVSPHLAAERENGVVEDA 199

Query: 228 AVMEMLEQCLSNELKFEGENETMDAFCVVETAGGVASPGPSGTLQCDLYRPFRFPGVLVG 287
           AV+E L+  L  E+  + +N   D+FC+VETAGGVASPGPSGTLQCDLYRPFRFPGVLVG
Sbjct: 200 AVLESLKNEL--EVINKDKNGKFDSFCIVETAGGVASPGPSGTLQCDLYRPFRFPGVLVG 257

Query: 288 DGRLGGISGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYLQNR 334
           DGRLGGISGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYL+NR
Sbjct: 258 DGRLGGISGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYLRNR 304



 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 43/46 (93%)

Query: 444 NATLQIELARDMGYAAGRFGHVMFPENVYEPALKCAELLLEGVGKG 489
           N  LQ ELARDMGYAAGRFGHVMFPENVYEPAL+CAELL+EGVG+G
Sbjct: 303 NRWLQTELARDMGYAAGRFGHVMFPENVYEPALECAELLVEGVGRG 348


>29980.m000178 adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase, putative
          Length = 254

 Score =  244 bits (624), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 120/160 (75%), Positives = 139/160 (86%), Gaps = 5/160 (3%)

Query: 178 MYNLNFNEKKKVLRDEAG---VSELICETLYAWKEAVSPHLAAERENGVVEDSAVMEMLE 234
           MY+LNF E+ K L ++ G    SELIC+TL+AW +AVSPHLAAERENGVVED+A++E L+
Sbjct: 1   MYDLNFREENKALSNDGGGADNSELICKTLFAWNDAVSPHLAAERENGVVEDAAILESLK 60

Query: 235 QCLSNELKFEGENETMDAFCVVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGGI 294
             L  E+  + +N   D+FC+VETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGG+
Sbjct: 61  NEL--EVINKDKNRKFDSFCIVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGGV 118

Query: 295 SGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYLQNR 334
           SGTISAYESLKLRGY+IVAVVFEDHGLVNEVPLLSYL+NR
Sbjct: 119 SGTISAYESLKLRGYNIVAVVFEDHGLVNEVPLLSYLRNR 158



 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 42/46 (91%)

Query: 444 NATLQIELARDMGYAAGRFGHVMFPENVYEPALKCAELLLEGVGKG 489
           N  LQ ELARDMGYAA RFGHVMFPENVYEPAL+CAELLLEGVG+G
Sbjct: 157 NRWLQTELARDMGYAAVRFGHVMFPENVYEPALECAELLLEGVGRG 202


>29980.m000177 adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase, putative
          Length = 337

 Score =  192 bits (488), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 107/124 (86%), Gaps = 2/124 (1%)

Query: 211 VSPHLAAERENGVVEDSAVMEMLEQCLSNELKFEGENETMDAFCVVETAGGVASPGPSGT 270
           + P   AERENGVVED+AV+E+L+  L  E   + +N  +D+FC++ETAG VASPGPSGT
Sbjct: 139 LKPVQTAERENGVVEDAAVLEILKIEL--EAINKDKNGKLDSFCIIETAGSVASPGPSGT 196

Query: 271 LQCDLYRPFRFPGVLVGDGRLGGISGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSY 330
           LQCDLY+PFRFPGVLVGDGRLGGISG ISAYESLK+RGYDIVAVVFEDHGLVNEVPLLSY
Sbjct: 197 LQCDLYKPFRFPGVLVGDGRLGGISGIISAYESLKIRGYDIVAVVFEDHGLVNEVPLLSY 256

Query: 331 LQNR 334
           L NR
Sbjct: 257 LGNR 260



 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 43/67 (64%), Gaps = 9/67 (13%)

Query: 55  SASTSPPLQFPLNHPIYMIWGSNTSLGKTLVSTGLASSFLLSPPPAXXXXXXXXXXXFLY 114
           S S   PL FPL++P ++IWGSNTSLGKTL+ TGLA SF LS P             FLY
Sbjct: 88  STSDPSPLSFPLSYPTFLIWGSNTSLGKTLIPTGLAFSFRLSSP---------GTRKFLY 138

Query: 115 LKPVQTG 121
           LKPVQT 
Sbjct: 139 LKPVQTA 145



 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 41/46 (89%)

Query: 444 NATLQIELARDMGYAAGRFGHVMFPENVYEPALKCAELLLEGVGKG 489
           N  LQ ELARDMGYAAGRFGHVMFPENVYE AL+CAELLLEGV KG
Sbjct: 259 NRWLQTELARDMGYAAGRFGHVMFPENVYELALECAELLLEGVAKG 304


>27879.m000012 adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase, putative
          Length = 353

 Score =  192 bits (488), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 107/124 (86%), Gaps = 2/124 (1%)

Query: 211 VSPHLAAERENGVVEDSAVMEMLEQCLSNELKFEGENETMDAFCVVETAGGVASPGPSGT 270
           + P   AERENGVVED+AV+E+L+  L  E   + +N  +D+FC++ETAG VASPGPSGT
Sbjct: 139 LKPVQTAERENGVVEDAAVLEILKIEL--EAINKDKNGKLDSFCIIETAGSVASPGPSGT 196

Query: 271 LQCDLYRPFRFPGVLVGDGRLGGISGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSY 330
           LQCDLY+PFRFPGVLVGDGRLGGISG ISAYESLK+RGYDIVAVVFEDHGLVNEVPLLSY
Sbjct: 197 LQCDLYKPFRFPGVLVGDGRLGGISGIISAYESLKIRGYDIVAVVFEDHGLVNEVPLLSY 256

Query: 331 LQNR 334
           L NR
Sbjct: 257 LGNR 260



 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 43/67 (64%), Gaps = 9/67 (13%)

Query: 55  SASTSPPLQFPLNHPIYMIWGSNTSLGKTLVSTGLASSFLLSPPPAXXXXXXXXXXXFLY 114
           S S   PL FPL++P ++IWGSNTSLGKTL+ TGLA SF LS P             FLY
Sbjct: 88  STSDPSPLSFPLSYPTFLIWGSNTSLGKTLIPTGLAFSFRLSSP---------GTRKFLY 138

Query: 115 LKPVQTG 121
           LKPVQT 
Sbjct: 139 LKPVQTA 145



 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 41/46 (89%)

Query: 444 NATLQIELARDMGYAAGRFGHVMFPENVYEPALKCAELLLEGVGKG 489
           N  LQ ELARDMGYAAGRFGHVMFPENVYE AL+CAELLLEGV KG
Sbjct: 259 NRWLQTELARDMGYAAGRFGHVMFPENVYELALECAELLLEGVAKG 304


>30179.m000579 hypothetical protein
          Length = 129

 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/157 (63%), Positives = 110/157 (70%), Gaps = 28/157 (17%)

Query: 178 MYNLNFNEKKKVLRDEAGVSELICETLYAWKEAVSPHLAAERENGVVEDSAVMEMLEQCL 237
           MY+LNF E+ K L                           ERENGVVED+AV+E L+  L
Sbjct: 1   MYDLNFREENKAL--------------------------TERENGVVEDAAVLESLKNEL 34

Query: 238 SNELKFEGENETMDAFCVVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGGISGT 297
             E+  + +N   D  C+VETAG VASPGPS TLQCDLYRPFRFPGVLVGDGRLGGIS T
Sbjct: 35  --EVINKDKNGKFDYICIVETAGAVASPGPSSTLQCDLYRPFRFPGVLVGDGRLGGISRT 92

Query: 298 ISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYLQNR 334
           ISAYESLKLRGYD VAVVFEDHGLVNEVPLLSYL+NR
Sbjct: 93  ISAYESLKLRGYDFVAVVFEDHGLVNEVPLLSYLRNR 129


>28446.m000003 hypothetical protein
          Length = 95

 Score =  171 bits (433), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 79/88 (89%), Positives = 83/88 (94%)

Query: 246 ENETMDAFCVVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGGISGTISAYESLK 305
           +N   D+FC+VETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGGISGTISAYESLK
Sbjct: 8   KNGKFDSFCIVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGGISGTISAYESLK 67

Query: 306 LRGYDIVAVVFEDHGLVNEVPLLSYLQN 333
           LRGYDIVAVVFEDHGLVNEV LL YL+N
Sbjct: 68  LRGYDIVAVVFEDHGLVNEVLLLLYLRN 95


>37380.m000003 hypothetical protein
          Length = 56

 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 52/56 (92%), Positives = 54/56 (96%)

Query: 278 PFRFPGVLVGDGRLGGISGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYLQN 333
           PFRFPGVL+GDGRLGGISGTISAY SLKLRGYD VAVVFEDHGLVNEVPLLSYL+N
Sbjct: 1   PFRFPGVLMGDGRLGGISGTISAYGSLKLRGYDFVAVVFEDHGLVNEVPLLSYLRN 56


>28707.m000042 adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase, putative
          Length = 84

 Score = 78.6 bits (192), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/35 (94%), Positives = 35/35 (100%)

Query: 455 MGYAAGRFGHVMFPENVYEPALKCAELLLEGVGKG 489
           MGYAAGRFGHVMFPENVYEPAL+CAELLLEGVG+G
Sbjct: 1   MGYAAGRFGHVMFPENVYEPALECAELLLEGVGRG 35