Jatropha Genome Database

JcCB0050531.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050531.20 - phase: 0 
         (263 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27798.m000584 3-oxo-5-alpha-steroid 4-dehydrogenase, putative         418   e-117
30131.m007142 dfg10 protein, putative                                  70   9e-13
28623.m000399 dfg10 protein, putative                                  65   3e-11
30003.m000326 Synaptic glycoprotein SC2, putative                      50   8e-07

>27798.m000584 3-oxo-5-alpha-steroid 4-dehydrogenase, putative
          Length = 263

 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/263 (77%), Positives = 223/263 (84%)

Query: 1   MAFSDQNLFDYSLLAFYLIGPPTFISLRFLQAPYGKHNRPGWGPTIFPPLAWFLMESXXX 60
           MAFSD +LF  SLLA YLIGPPTFISL+FLQAPYGKHNRPGWGPTI PPLAWFLMES   
Sbjct: 1   MAFSDGSLFHKSLLALYLIGPPTFISLKFLQAPYGKHNRPGWGPTISPPLAWFLMESPTL 60

Query: 61  XXXXXXXXXGQHATNFKALILMSPYIIHYFHRTCIYPLRLYLNASQQNTKAASGFPVSVA 120
                    GQHA+N KA +LM PY+ HYFHRTC+YPLRLY N +Q+NTK  SGFPVS+A
Sbjct: 61  WLTFLLFPFGQHASNPKAWVLMFPYLFHYFHRTCLYPLRLYWNTNQRNTKITSGFPVSMA 120

Query: 121 LIAFGFNLLNAYLQSRWVSHYKDDYDSDGWFWWKFIGGLFVFIWGMWINIWSDRVLVGLK 180
           L+AF FN LNAYLQ+RWVSHYK+DYD D WFWW+F GGL VF WGMW N+WSDRVLV LK
Sbjct: 121 LLAFLFNFLNAYLQARWVSHYKEDYDQDRWFWWRFWGGLVVFAWGMWTNVWSDRVLVRLK 180

Query: 181 RQGGGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFLYTCANLVPRAHANH 240
           R+G GYKVPRGG F+LVSCPNYFGEIVEW+GW+LMTWSWVGFGFFLYT ANLVPRA ANH
Sbjct: 181 REGDGYKVPRGGLFDLVSCPNYFGEIVEWLGWTLMTWSWVGFGFFLYTSANLVPRAVANH 240

Query: 241 KWYQDKFGEDYPKSRKAVIPFLY 263
           KWY DKFG+DYP+ RKAVIPFLY
Sbjct: 241 KWYLDKFGKDYPRGRKAVIPFLY 263


>30131.m007142 dfg10 protein, putative
          Length = 339

 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 26/174 (14%)

Query: 109 TKAASGFPVSVALIAFGFNLLNAYLQSRWVSHYKDDYDSDGWFWWKFIGGLFVFIWGMWI 168
           T A      + AL  F F    A   ++++   K    S  + WW F+  L    W  WI
Sbjct: 173 TAAPLSLCATCALEVFKFGKDEA---AQFIIKGKSAMHSIEFDWWDFVNPLLKLGWYQWI 229

Query: 169 N----IWSD------RVLVGLKRQGG----GYKVPRGGWFELVSCPNYFGEIVEWVGWSL 214
                +W          ++G  R+ G     Y +P G WFE+VS P+Y  EIV + G   
Sbjct: 230 GATLFLWGSIHQHHCHTILGSLREHGRKVDEYVIPHGDWFEIVSSPHYLAEIVIYAGLVF 289

Query: 215 MTWS-----WVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFLY 263
            +       W+ F F     ANLV  A   H+WY  KF ++YP +R AVIP++Y
Sbjct: 290 ASGGADLTIWLLFAF---VVANLVLAAAETHRWYLRKF-DNYPSNRLAVIPYIY 339


>28623.m000399 dfg10 protein, putative
          Length = 342

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 21/126 (16%)

Query: 149 GWFWWKFIGGLFVFIWGMWINIWSDRVLVG----LKRQGGGYKVPRGGWFELVSCPNYFG 204
           GW  W    G  +F  G W++      ++G     +RQ   Y +P G WFE+VS P+Y  
Sbjct: 227 GWCQW---AGAAIFACG-WVHQQRCHAILGSLRKQRRQVDEYLIPHGDWFEMVSSPHYLA 282

Query: 205 EIVEWVGW-------SLMTWSWVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKA 257
           E++ ++G         L  W        L+  ANL   A    +WY  KF EDYP++R+A
Sbjct: 283 EMIIYLGLLVASGGNDLTIWL-----LNLFVVANLAFAAAETQRWYLQKF-EDYPRNRRA 336

Query: 258 VIPFLY 263
           ++PF+Y
Sbjct: 337 ILPFVY 342


>30003.m000326 Synaptic glycoprotein SC2, putative
          Length = 310

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 183 GGGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFLYTCANLVPRAHANHKW 242
            GGY++P G  F +V+C NY  EI +W+G+++ T +  G+ F +   + +   A A H+ 
Sbjct: 226 SGGYQIPHGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYIFLVVAASIMTNWALAKHRR 285

Query: 243 YQDKF-GED----YPKSRKAVIPFL 262
            +  F G+D    YP+    + PFL
Sbjct: 286 LRKLFDGKDGRPKYPRRWVILPPFL 310