Jatropha Genome Database

JcCB0050421.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050421.20 + phase: 1 /TE
         (1716 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29674.m000206 conserved hypothetical protein                          275   1e-73
29997.m000412 conserved hypothetical protein                           71   5e-12
30017.m000314 conserved hypothetical protein                           66   1e-10
28296.m000014 conserved hypothetical protein                           65   4e-10
29904.m003003 conserved hypothetical protein                           58   4e-08
30198.m000852 conserved hypothetical protein                           55   4e-07

>29674.m000206 conserved hypothetical protein
          Length = 496

 Score =  275 bits (704), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 136/232 (58%), Positives = 177/232 (76%), Gaps = 1/232 (0%)

Query: 498 RLKKAQDDKSFLKFLDVFKKLQINIPFAEALAQMPSYAKFLKDILSKKRKIDDQGTVMLT 557
           RL++ + DK + KFLD+FK+L+IN+PF EA++QM  YAKFLK+ILS  RK++D G V+L 
Sbjct: 191 RLRQDKVDKQYSKFLDLFKQLKINLPFVEAISQMAKYAKFLKEILSNNRKLEDLGQVVLN 250

Query: 558 EECSAIIQNKLPPKLKDPGSFSIPCNIGNLDFEKALADLGASINLMSYEVFKMLGMGELK 617
           EECSAI+QNKLP K +D  SF+IPC IG+L    ALADLGASINLM   +F  LG+ E K
Sbjct: 251 EECSAILQNKLPLKRRDLESFTIPCMIGDLSISGALADLGASINLMPTSLFAKLGLHEPK 310

Query: 618 PTRMSLQLADRSIKYPRGIVEDVLVKVGTFIFPVDFVILDIDEDREGSLILGRPFLATAR 677
           PTRMS+QLADR++K PRGI+EDVL+KV  FIFPVDFV++D++ +    LILGRPFLAT+R
Sbjct: 311 PTRMSVQLADRTVKIPRGIIEDVLIKVDKFIFPVDFVVMDMEGESTVPLILGRPFLATSR 370

Query: 678 ALIDVYEGKLTLRVGQEEIVFDVLKSCKLPMDYGD-CFRIDVVDECVENTLH 728
           A+IDV +GKL LRV  E I FD+  S +  +DY +  +  DV+D+ VE+ L 
Sbjct: 371 AVIDVSDGKLKLRVDDETITFDLATSMRQSLDYDNTVYSTDVIDDVVESHLQ 422



 Score =  112 bits (281), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 82/131 (62%), Gaps = 3/131 (2%)

Query: 194 LYEAWERFKDLLRKCPHHSLPKWLQVQTFYNALSPNIKITLDAAAGGSFEKKGIDEAYEL 253
           +Y+AWERFKDLLR CPHH L  W+QVQTFY+ L+   +  +DAAAGG+   K  ++A  L
Sbjct: 1   MYDAWERFKDLLRCCPHHGLLVWMQVQTFYSGLNLATRQMVDAAAGGALNNKTPEQAQNL 60

Query: 254 IEEMASNSHYQNNTERR--RTAGVYEIDAITALNAKVDNMVRKLDMLTTNPVNSVMQVCD 311
           IEEMA N++   ++  R  R   V ++D+  AL A+V+ + +K+D L T PV++    C+
Sbjct: 61  IEEMAMNNNQWQSSRSRPGRQGVVNQVDSTAALAAQVELLAKKIDQLQT-PVHAANVGCE 119

Query: 312 RCNGQHGIGEC 322
            C   H    C
Sbjct: 120 FCGSPHYSVNC 130


>29997.m000412 conserved hypothetical protein
          Length = 66

 Score = 70.9 bits (172), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 44/53 (83%)

Query: 498 RLKKAQDDKSFLKFLDVFKKLQINIPFAEALAQMPSYAKFLKDILSKKRKIDD 550
           R K+A+  + F KFLD+F++L IN+PF +AL QMP YAKFLKDILS+KRK+++
Sbjct: 11  RAKQAEAKEQFSKFLDIFRQLHINLPFIDALEQMPKYAKFLKDILSRKRKLEE 63


>30017.m000314 conserved hypothetical protein
          Length = 116

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 38/53 (71%)

Query: 410 QQAAIRNLEIQLGQFANMMASRPQGTLPSNTEKNPKEQVQAITLRSGKQLDEP 462
           QQA+I+NLE Q+GQ + MM  R   TLPSNTE NP    +AITLRSGK+L  P
Sbjct: 52  QQASIQNLETQIGQLSRMMVERQPDTLPSNTESNPTGHAKAITLRSGKELPSP 104


>28296.m000014 conserved hypothetical protein
          Length = 90

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 51/76 (67%)

Query: 757 HLKHAFLGENHSFPVIISSHLTLDQEKRLLQVLNRHKKALGWHILDLQGISPSVCMHKIL 816
           HLK+ +LGEN++ PVIIS+ LT  Q++R+++     K+ +   I ++Q  S S+ MHKIL
Sbjct: 12  HLKYVYLGENNTLPVIISNKLTRLQKERVVKEPRDRKRVVSQTICNIQSNSFSIYMHKIL 71

Query: 817 MEEDYKPSIEHQRRLN 832
           +EE  K + E QR LN
Sbjct: 72  LEEGSKANFEPQRILN 87


>29904.m003003 conserved hypothetical protein
          Length = 361

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 10/137 (7%)

Query: 99  YGGLPSEDPNAHITNFLEICDTFKQNGVSEDAIKLRLFPFTLRDKARSW----LQSCPAG 154
           + G  +E P AH++ F+++C   + N  S   + +R+FP TL ++A  W    +Q  P+ 
Sbjct: 86  FHGNSNECPIAHLSRFVKVC---RANNASSTDMMMRIFPVTLENEAALWYDLNIQPYPSL 142

Query: 155 SFTTWDELAQKFLAKFFPSSKTTKLRNEIMTFAHHDQESLYEAWERFKDLLRKCPHHSLP 214
           S   WDE+   FL  +       +LR+++M       ES+   + R + +L++ P H L 
Sbjct: 143 S---WDEIMLSFLEAYQRIKLVDQLRSDLMMLNQGSDESVRSYFMRLQWILKRWPDHGLS 199

Query: 215 KWLQVQTFYNALSPNIK 231
             +    F + L  N K
Sbjct: 200 DNMLKWIFIDGLMGNFK 216


>30198.m000852 conserved hypothetical protein
          Length = 105

 Score = 54.7 bits (130), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 2/53 (3%)

Query: 673 LATARALIDVYEGKLTLRVGQEEIVFDVLKSCK-LPMDYGD-CFRIDVVDECV 723
           + T++AL+DV+EGKLTLRVG E I FD+ K+ K   +   D C R+DVVD+C+
Sbjct: 1   MNTSKALVDVHEGKLTLRVGDESIDFDMFKAVKNFDVREDDVCIRVDVVDDCL 53