Jatropha Genome Database

JcCB0050341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050341.10 - phase: 0 /partial
         (379 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m001969 UDP-n-acteylglucosamine pyrophosphorylase, putative     678   0.0  

>29648.m001969 UDP-n-acteylglucosamine pyrophosphorylase, putative
          Length = 622

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/379 (88%), Positives = 353/379 (93%)

Query: 1   MESTTEALSKLNINGDFASSVXXXXXXXXXXXXEQIELAKILVEMGQSHLFEHWPEPGVD 60
           M+S TE+LSKLNI GDFASS+            +QI+LAK+LVEMGQ+HLF+HW EPGVD
Sbjct: 1   MDSATESLSKLNIGGDFASSLPSLHKNLHLLSPDQIKLAKMLVEMGQTHLFQHWSEPGVD 60

Query: 61  DEEKKALFDQVARLNSSYPGGLASYIKTARELLADSKAGKNPFDGFTPSVPTGENLTFGD 120
           DEEK+ALF QV+RL+SSYPGGLASYIK ARELLADSKAGKNPF+GFTPSVPTGENLTF D
Sbjct: 61  DEEKEALFHQVSRLDSSYPGGLASYIKIARELLADSKAGKNPFEGFTPSVPTGENLTFAD 120

Query: 121 ENFVKFEEAGVREAQNAAFVLVAGGLGERLGYNGIKVALPMETTTGTCFLQHYIESVLAL 180
           ENFVKFEE GVREAQNAAFVLVAGGLGERLGYNGIKVALPMETTTGTCFLQHYIES+LAL
Sbjct: 121 ENFVKFEEVGVREAQNAAFVLVAGGLGERLGYNGIKVALPMETTTGTCFLQHYIESILAL 180

Query: 181 QEASYRLTQGECQRDIPFVIMTSDDTHSRTLELLESNSYFGMKTSQIILLKQEKVACLED 240
           QEASYRLTQG+CQRDIPFVIMTSDDTH+RTLELLESNSYFGMK SQ+ LLKQEKVACLED
Sbjct: 181 QEASYRLTQGKCQRDIPFVIMTSDDTHARTLELLESNSYFGMKPSQVKLLKQEKVACLED 240

Query: 241 NDARLALDPHNKYRIQTKPHGHGDVHSLLYSSGLLSKWRDAGLRWVLFFQDTNGLLFKAI 300
           NDARLALDP N YRIQTKPHGHGDVHSLLYSSGLLS W DAGLRWVLFFQDTNGLLFKAI
Sbjct: 241 NDARLALDPQNIYRIQTKPHGHGDVHSLLYSSGLLSTWHDAGLRWVLFFQDTNGLLFKAI 300

Query: 301 PASLGVSATKQYHVNSLAVPRKAKEAIGGITKLTHADGRSMVINVEYNQLDPLLRATGHP 360
           PASLGVSATKQYHVNSLAVPRKAKEAIGGITKLTH DGRSMVINVEYNQLDPLLRATG+P
Sbjct: 301 PASLGVSATKQYHVNSLAVPRKAKEAIGGITKLTHTDGRSMVINVEYNQLDPLLRATGNP 360

Query: 361 DGDVNCETGYSPFPGNINQ 379
           DGDVNC+TGYSPFPGNINQ
Sbjct: 361 DGDVNCDTGYSPFPGNINQ 379