Jatropha Genome Database

JcCB0049771.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0049771.20 - phase: 0 /partial
         (140 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29506.m000170 Beta-ureidopropionase, putative                         278   8e-76

>29506.m000170 Beta-ureidopropionase, putative
          Length = 415

 Score =  278 bits (710), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 127/139 (91%), Positives = 134/139 (96%)

Query: 1   CFHPSATVGELSEPMWPVEARNAAIANSYFVGSINRVGTEIFPNPFTSGDGKPQHSDFGH 60
            F+PSATVGELSEPMWP+EARNAAIANSYFVGSINRVGTEIFPNPFTSGDGKPQH+DFGH
Sbjct: 276 VFNPSATVGELSEPMWPIEARNAAIANSYFVGSINRVGTEIFPNPFTSGDGKPQHTDFGH 335

Query: 61  FYGSSHFSAPDASCTPSLSRYKDGLLISDMDLNLCRQLKDKWGFRMTARYELYADMLASY 120
           FYGSSHFSAPDASCTPSLSRYKDGLLISDMDLNLCRQ+KDKWGFRMTARYELYAD    Y
Sbjct: 336 FYGSSHFSAPDASCTPSLSRYKDGLLISDMDLNLCRQIKDKWGFRMTARYELYADTFDRY 395

Query: 121 LKPDFEPQIISDPLLHKKS 139
           LKPDFEPQ++SDPLLHK+S
Sbjct: 396 LKPDFEPQVVSDPLLHKRS 414