Jatropha Genome Database

JcCB0049771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0049771.10 - phase: 0 
         (202 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29506.m000171 EXECUTER1 protein, chloroplast precursor, putative      127   4e-30
30147.m013960 EXECUTER1 protein, chloroplast precursor, putative       54   6e-08

>29506.m000171 EXECUTER1 protein, chloroplast precursor, putative
          Length = 675

 Score =  127 bits (318), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/201 (42%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 1   MASIAPPTPPHKLSFRTPKFLVKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MASI+PPTP HKLSF+  KFL ++                                    
Sbjct: 1   MASISPPTP-HKLSFKKHKFLPRKRQFYPSSTSSSIYSTPSLCRCSTNASDDSSSSSI-- 57

Query: 61  XXXXXEWRWDAAFHGVIESAKKRIDSLINPRRKEVEVGAVGDRESGKGDKVXXXXXXXXX 120
                +W W+A F GVI SA K+I+S  N   K+ E     +RE  K +           
Sbjct: 58  -----QWPWNAPFQGVIGSAMKKIESFFNNNDKKEEHSG-NNRE--KDEISEEDNWDWDR 109

Query: 121 XXXXXXXVDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRA 180
                  VD+QERIV+VLKSQL HAVNREDYE             TND VG VMSQLNRA
Sbjct: 110 WRKHFDEVDDQERIVTVLKSQLGHAVNREDYEDAARLKVAIAAAATNDVVGRVMSQLNRA 169

Query: 181 VTEEHYKDAAFLRDNAGAGLV 201
           V EE Y+DAA LRDNAGAGLV
Sbjct: 170 VAEERYQDAALLRDNAGAGLV 190


>30147.m013960 EXECUTER1 protein, chloroplast precursor, putative
          Length = 658

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%)

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           +++ E   SVLK QL  A+ +ED++             + DSV  +MS+L  A+ EE Y 
Sbjct: 105 IEQVESFASVLKFQLEDAIEKEDFQEAAKLKLAIAEATSKDSVAEIMSELQNAIDEERYH 164

Query: 188 DAAFLRDNAGAGLV 201
           DA+ L    G+GLV
Sbjct: 165 DASRLCKYTGSGLV 178