Jatropha Genome Database
- JcCB0049611.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0049611.10 + phase: 0 /pseudo/partial
(358 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013797 Ubiquinone biosynthesis protein coq-8, putative 571 e-163
28226.m000855 Ubiquinone biosynthesis protein coq-8, putative 99 3e-21
29732.m000312 Protein ABC1, mitochondrial precursor, putative 92 4e-19
27914.m000429 Ubiquinone biosynthesis protein coq-8, putative 86 3e-17
29848.m004496 Protein ABC1, mitochondrial precursor, putative 75 6e-14
30055.m001628 Ubiquinone biosynthesis protein coq-8, putative 74 1e-13
28644.m000930 Protein ABC1, mitochondrial precursor, putative 68 8e-12
28226.m000837 Protein ABC1, mitochondrial precursor, putative 68 8e-12
28833.m000154 ATATH9, putative 64 7e-11
29729.m002385 Protein ABC1, mitochondrial precursor, putative 64 1e-10
29904.m002976 Protein ABC1, mitochondrial precursor, putative 62 3e-10
29933.m001441 ATATH13, putative 49 3e-06
>30147.m013797 Ubiquinone biosynthesis protein coq-8, putative
Length = 503
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/300 (91%), Positives = 287/300 (95%)
Query: 38 LSRLMMTDIRNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFIREANAMERIRRFLY 97
+ LMMTDIRNLQAFALYMQ TDIKFDLYSVTKEMEKQIGYEFDF+REANAMERIR FLY
Sbjct: 171 VQELMMTDIRNLQAFALYMQNTDIKFDLYSVTKEMEKQIGYEFDFVREANAMERIRHFLY 230
Query: 98 ENNKRTPVVVPRVLKDMVTRRVLMMEYIDGIPILNLGNEIAKRGIDPRGKVAAAAKQNIL 157
ENNK++PV VPRVLK+MVTRRVL+MEY+DGIPILNLG+EIAKRGI+P GK+A AKQNIL
Sbjct: 231 ENNKKSPVSVPRVLKNMVTRRVLVMEYVDGIPILNLGDEIAKRGINPGGKIATTAKQNIL 290
Query: 158 KSLTLAYGQMILKSGFFHADPHPGNILICKGSEASRHVALLDYGQVKDLPDSLRLGYANL 217
KSLTLAYGQMILKSGFFHADPHPGNILICKGSEAS VALLDYGQVKDLPDSLRLGYANL
Sbjct: 291 KSLTLAYGQMILKSGFFHADPHPGNILICKGSEASHQVALLDYGQVKDLPDSLRLGYANL 350
Query: 218 VLAMADNDPIKASESYRELGIGTLSSCENELQELLKLAQTMFDTKLPPGVVMLQPFSEDS 277
V+AMADNDPIKASESYRELGIGTLS CENELQELLKLAQTMFDTKLPPGVV+LQPF+EDS
Sbjct: 351 VVAMADNDPIKASESYRELGIGTLSKCENELQELLKLAQTMFDTKLPPGVVILQPFTEDS 410
Query: 278 SIKKIAVEAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEALYLAGRLKGGFM 337
SIKKIAVEAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEALY AGRLKGG +
Sbjct: 411 SIKKIAVEAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEALYEAGRLKGGLL 470
>28226.m000855 Ubiquinone biosynthesis protein coq-8, putative
Length = 965
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 38 LSRLMMTDIRNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFIREANAMERIRRFLY 97
+ +++ D++N ++ ++ + ++D + E K+ E DF EA + L
Sbjct: 154 IKTIILEDLKNAKSIVDWIAWAEPQYDFNPMIDEWCKEAPKELDFNIEAENTRIVSSNLG 213
Query: 98 ENNK--------RTPVVVPRVLKDMVTRRVLMMEYIDGIPILNLGNEIAKRGIDPRGKVA 149
NK + V++P V++ + +VL++EY+DGI + +L + G+D
Sbjct: 214 CRNKNKDSRHANQVDVLIPEVIQS--SEKVLILEYMDGIRLNDL-ESLEAYGVD------ 264
Query: 150 AAAKQNILKSLTLAYGQMILKSGFFHADPHPGNILICKGSEASRHVALLDYGQVKDLPDS 209
KQ +++ +T AY I GFF+ DPHPGN L+ K + LLD+G K + S
Sbjct: 265 ---KQKVVEEITRAYAYQIYIDGFFNGDPHPGNFLVSK--DPQHRPVLLDFGLTKKISSS 319
Query: 210 LRLGYANLVLAMADNDPIKASESYRELGIGTLSSCENELQELLKLAQTMFDTKLPPGVVM 269
++ A + LA + D + ++ E+G+ ++ +++ F T P
Sbjct: 320 IKQALAKMFLASVEGDHVALLSAFAEMGLKLRLDLP---EQAMEVTNVFFRTSTPANEAF 376
Query: 270 --LQPFSEDSS----------------IKKI-AVEAFPEELFSVLRTVHLLRGLSVGLGI 310
++ +E S +K+ V+AFP ++ R ++LLRGLS + +
Sbjct: 377 ENMKSLAEQRSKNMKVIQEKMKLSQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNV 436
Query: 311 NYSCAEQWRPIAEEAL 326
E RP AE AL
Sbjct: 437 RIIYQEIMRPFAEFAL 452
>29732.m000312 Protein ABC1, mitochondrial precursor, putative
Length = 707
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 139/309 (44%), Gaps = 34/309 (11%)
Query: 38 LSRLMMTDIRNLQAFALYMQKTDI----KFDLYSVTKEMEKQIGYEFDFIREANAMERIR 93
L +L D+RNL+ A Y Q+++ D + +E K + E D+I E +R R
Sbjct: 303 LKKLFDIDLRNLKLIAEYFQRSETFGGPTRDWIGIYEECSKILYQEIDYINEGKNADRFR 362
Query: 94 RFLYENNKRTPVVVPRVLKDMVTRRVLMMEYIDGIPILNLGNEIAKRGIDPRGKVAAAAK 153
R + N K V VP V D +VL +EY+ GI I L + + RG + R ++++ A
Sbjct: 363 R-DFRNVKW--VRVPLVFWDYTAMKVLTLEYVPGIKINQL-DMLDSRGYN-RPQISSRAI 417
Query: 154 QNILKSLTLAYGQMILKSGFFHADPHPGNILICKGSEASRHVALLDYGQVKDLPDSLRLG 213
+ +Y ILK+GFFHADPHPGN+ + + + D+G + ++ + R
Sbjct: 418 E--------SYLIQILKTGFFHADPHPGNLAV----DVDESLIYYDFGMMGEIKNFTRER 465
Query: 214 YANLVLAMADNDPIKASESYREL----GIGTLSSCENELQELLK--LAQTMFDTKLPPGV 267
L A+ + D K +S +L G LSS +Q L L+QT P
Sbjct: 466 LLELFYAVYEKDAKKVMQSLIDLEALQPTGDLSSVRRSVQFFLDNLLSQT------PDQQ 519
Query: 268 VMLQPFSED-SSIKKIAVEAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEAL 326
L ED +I + FP VLR L G+ L ++S + P A+E L
Sbjct: 520 QTLATIGEDLFAIAQDQPFRFPSTFTFVLRAFSTLEGIGYILDPDFSFVKIAAPYAQELL 579
Query: 327 YLAGRLKGG 335
L R G
Sbjct: 580 DLRKRQSTG 588
>27914.m000429 Ubiquinone biosynthesis protein coq-8, putative
Length = 548
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 115/258 (44%), Gaps = 27/258 (10%)
Query: 60 DIKFDLYSVTKEMEKQIGYEFDFIREANAMERIRRFLYENNKRTPVVVPRVLKDMVTRRV 119
D +FD + E K I E DFI+EA ER + N V VP++ ++ TR+V
Sbjct: 230 DYRFDW--LISEFTKAISSELDFIQEAGNSERTAKNFKNKN---IVKVPQIFWELTTRQV 284
Query: 120 LMMEYIDGIPILNLGNEIAKRGIDPRGKVAAAAKQNILKSLTLAYGQMILKSGFFHADPH 179
L ME+ G + ++ + + I+P GKVA K+L + +MI GF H DPH
Sbjct: 285 LTMEFCHGHKVDDV-EFLKEMEINP-GKVA--------KALVEVFAEMIFIHGFVHGDPH 334
Query: 180 PGNILICKGSEASRHVALLDYGQVKDLPDSLRLGYANLVLAMADNDPIKASESYRELGIG 239
PGNI I + LLD+G K L D R Y L A+ D + + +G
Sbjct: 335 PGNIFISPEGPNRFSLVLLDHGIYKQLDDKFRHNYCQLWKALILQDSHQIEQLGERFNVG 394
Query: 240 TLSSCENELQELLKLAQTMFD-TKLPPGVVMLQPFSEDSSIKKIA-------VEAFPEEL 291
S ++ +T+ + L G++ + +K + +E+ P +
Sbjct: 395 KYS----RYFPVIFTGRTIHSKSALGKGMLAEEKKVLKQDLKSLTMEDISSFMESLPPDF 450
Query: 292 FSVLRTVHLLRGLSVGLG 309
++LRT LLR + LG
Sbjct: 451 LTILRTDGLLRSVLSKLG 468
>29848.m004496 Protein ABC1, mitochondrial precursor, putative
Length = 732
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 29/218 (13%)
Query: 35 AILLSRLMMTDIRNLQAFALYMQKTDIKF------DLYSVTKEMEKQIGYEFDFIREANA 88
A+ + R M+ + L A +M +K DL E+ + + E D+I E
Sbjct: 235 AVKVQRPGMSVLLTLDALLFHMIGGQLKRFAKARKDLLVAVNEVVRHMFDEIDYILEGKN 294
Query: 89 MERIRRFLY--------ENNKRTPVVVPRVLKDMVTRRVLMMEYIDGIPILNLGNEIAKR 140
ER LY K V VP++ D + VL ME+IDGI + N + +
Sbjct: 295 AERFAS-LYGRDPCNSMHQKKAKSVKVPKIYWDATCKGVLTMEWIDGIKLTNEA-ALKRA 352
Query: 141 GIDPRGKVAAAAKQNILKSLTLAYGQMILKSGFFHADPHPGNILICKGSEASRHVALLDY 200
G++ R + Q + SL + +L+ GFFHADPHPGN++ + S +A D+
Sbjct: 353 GLNRRKLI----DQGLYCSL-----RQLLEVGFFHADPHPGNLV----ATDSGFLAYFDF 399
Query: 201 GQVKDLPDSLRLGYANLVLAMADNDPIKASESYRELGI 238
G + D+P R+G +++ + D + + + LG
Sbjct: 400 GMMGDIPRHYRVGLIQMLVHFVNRDSLGLANDFLSLGF 437
>30055.m001628 Ubiquinone biosynthesis protein coq-8, putative
Length = 528
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 29/275 (10%)
Query: 61 IKFDLYSVTKEMEKQIGYEFDFIREANAMERIRRFLYENNKRTPVVVPRVLKDMVTRRVL 120
I D+ ++ E +++ E ++++E R R+ LY + + ++VP + D + ++L
Sbjct: 254 ITSDVVALIDEFARRVYQELNYVQEGQNARRFRK-LYADKED--ILVPDIYWDYTSGKIL 310
Query: 121 MMEYIDGIPILNLGNEIAKRGIDPRGKVAAAAKQNILKSLTLAYGQMILKSGFFHADPHP 180
ME+++G+ LN N I ++G+ KV I SL + +L+ G+FHADPHP
Sbjct: 311 TMEWVNGVK-LNEQNAIERQGL----KVLDLVNTGIQCSL-----RQLLEYGYFHADPHP 360
Query: 181 GNILICKGSEASRHVALLDYGQVKDLPDSLRLGYANLVLAMADNDPIKASESYRELGIGT 240
GN+L + +A LD+G + + P+ R V+ M + D + Y L
Sbjct: 361 GNLLATPEGK----LAFLDFGMMSETPEEARSAIIGHVVHMVNRDYEAMARDYYALD--- 413
Query: 241 LSSCENELQELLKLAQTMFDTKLPPGVVMLQPFSEDSSIKKIAVEA---FPEELFSVLRT 297
S + ++ ++ Q FD L V L + + + + P +LR+
Sbjct: 414 FLSRDVDVSPIVPALQNFFDDALSYTVSELNFKTLVDGLGAVFYQYPFNVPAYYALILRS 473
Query: 298 VHLLRGLSVGLGINYSCAEQWRPIAEEALYLAGRL 332
+ +L GL++ N+ P Y A RL
Sbjct: 474 LTVLEGLALYADPNFKVLAASYP------YFAKRL 502
>28644.m000930 Protein ABC1, mitochondrial precursor, putative
Length = 711
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 58 KTDIKF--DLYSVTKEMEKQIGYEFDFIREANAMERIRRFLYENNKRTPVVVPRVLKDMV 115
KT KF DL ++ + + E D+++EAN + R+ LY K V VP + +
Sbjct: 249 KTAGKFNSDLQAIVDDWASSLFREMDYVKEANNGLKFRK-LYGAIK--DVSVPDMYMEYT 305
Query: 116 TRRVLMMEYIDGIPILNLGNEIAKRGIDPRGKVAAAAKQNILKSLTLAYGQMILKSGFFH 175
TR+VL+ME+I+G K+ +++ +L+ GF+H
Sbjct: 306 TRKVLVMEWIEG------------------QKLTETDDIYLVEVGVYCSFNQLLEYGFYH 347
Query: 176 ADPHPGNILICKGSEASRHVALLDYGQVKDLPDSLRLGYANLVLAMADNDPIKASESYRE 235
ADPHPGN L + +A LD+G + + LR G+ L + + D ++ +
Sbjct: 348 ADPHPGNFLRTYDGK----LAYLDFGMMGEFKQELRDGFIEACLHLVNRDFDALAKDFFT 403
Query: 236 LGIGTLSSCENELQELLKLAQTMFDTKLPPGVVMLQPFSE-----DSSIKKIAVEAFPEE 290
LG+ ++ + + E L +F + + GV + F + +++ K + P
Sbjct: 404 LGLLPPTANKKAVTEAL---TGVFQSAVAKGVRNIS-FGDLLGNLGTTMYKFKFQ-IPSY 458
Query: 291 LFSVLRTVHLLRGLSVGLGINYSCAEQWRP-IAEEALY-----LAGRL-----KGGFMQI 339
F V+R++ +L G+++ +Y P IA + L L L K G +I
Sbjct: 459 FFLVIRSLAVLEGIAISFNPDYKVLGSTYPWIARKVLTDSSPKLKSSLQALLYKEGVFRI 518
Query: 340 SRLEFVNADCL 350
RLE + ++ L
Sbjct: 519 DRLESLLSESL 529
>28226.m000837 Protein ABC1, mitochondrial precursor, putative
Length = 681
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 47 RNLQAF--ALYMQKTDIKFDLYSVTKEMEKQIGYEFDFIREANAMERIRRFLYENNKRTP 104
R L +F + +QK +L + E +++ E D+ EA +E FL EN K P
Sbjct: 274 RTLASFLNGISLQKLGCNAEL--IVDEFGEKLLEELDYTLEARNIED---FL-ENFKDDP 327
Query: 105 VV-VPRVLKDMVTRRVLMMEYIDGIPILNLGNEIAKRGIDPRG----KVAAAAKQNILKS 159
V +PRV K + RV++ME+IDGI N I + GID G V+AA +Q
Sbjct: 328 TVKIPRVYKKLSGSRVIVMEWIDGIRCTN-PKAIKEAGIDVNGFLTVGVSAALRQ----- 381
Query: 160 LTLAYGQMILKSGFFHADPHPGNILICKGSEASRHVALLDYGQVKDLPDSLRLGYANLVL 219
+L+ G FH DPHPGNI + +A +D+G V L + + V+
Sbjct: 382 --------LLEFGLFHGDPHPGNIFAMRDG----RIAYVDFGNVAVLSQQNKQILIDAVV 429
Query: 220 AMADNDPIKASESYRELG 237
+ D + + + LG
Sbjct: 430 HAVNEDYAEMANDFTRLG 447
>28833.m000154 ATATH9, putative
Length = 549
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 79 EFDFIREANAMERIRRFLYENNKRTP-----VVVPRVLKDMVTRRVLMMEYIDGIPILNL 133
E DF+ EA E+ L+ K +P V P+V ++ T ++L ME+ID + N
Sbjct: 243 ELDFLVEAKNSEKC---LHNFRKLSPHIADYVYAPKVHWNLSTSKLLTMEFIDAAQV-ND 298
Query: 134 GNEIAKRGIDPRGKVAAAAKQNILKSLTLAYGQMILKSGFFHADPHPGNILICKGSEASR 193
I GI P + K ++ + +M+ K GF H DPH N+L+ R
Sbjct: 299 VKAIQGLGIQP---------CEVAKLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSDRR 349
Query: 194 HV--------ALLDYGQVKDLPDSLRLGYANLVLAMADNDPIKASESYRELGIG 239
+ LLD+G K+L + R YA L A+ D E+ +LG G
Sbjct: 350 SILGKRKPQLILLDHGLYKELDFTTRFNYAALWKALVFADAHSIKENSVKLGAG 403
>29729.m002385 Protein ABC1, mitochondrial precursor, putative
Length = 503
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 65 LYSVTKEMEKQIGYEFDFIREANAMERIRRFLYENNKRTPVVVPRVLKDMVTRRVLMMEY 124
L ++ K++ + + E DF +EA +E RR+L P+V + TRRVL ME
Sbjct: 258 LVAIVKDIRESMLEEVDFYKEAANVEAFRRYLEAMGLTRQATAPKVYQHCSTRRVLTMER 317
Query: 125 IDGIPILNLGNEIAKRGIDPRGKVAAAAKQNILKSLTLAYGQMILKSGFFHADPHPGNIL 184
+ G+P+ +L D + A+ + +++ +L + +G + L FHAD H GN+
Sbjct: 318 LYGVPLTDL---------DSISSLVASPETSLITALNVWFGSL-LACETFHADVHAGNLW 367
Query: 185 ICKGSEASRHVALLDYGQV 203
+ + + LD+G V
Sbjct: 368 LLRDG----RIGFLDFGIV 382
>29904.m002976 Protein ABC1, mitochondrial precursor, putative
Length = 804
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 31/200 (15%)
Query: 31 KVERAILLSRLMMTDIRNLQAFALYMQK-TDIKFDLYSVTKEMEKQIGYEFDFIREANAM 89
KV+R +L + + D+ ++ L+++K I D+ + E + E D++ E
Sbjct: 306 KVQRPFVLETVTV-DLFIIRNLGLFLRKFPQISVDVVGLVDEWAARFFEELDYVNEG--- 361
Query: 90 ERIRRFLYENNKRTP-VVVPRVLKDMVTRRVLMMEYIDGIPILNLGNEIAKRGIDPRGKV 148
E F K P VVVP+ + +R+VL ++IDG K+
Sbjct: 362 ENGTLFAEMMRKDLPQVVVPKTYEKYTSRKVLTTQWIDG------------------EKL 403
Query: 149 AAAAKQNI---LKSLTLAYGQMILKSGFFHADPHPGNILICKGSEASRHVALLDYGQVKD 205
+ + + ++ + + Y + +L +GFFHADPHPGN++ + +A+LD+G V
Sbjct: 404 SQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGK----LAILDFGLVTK 459
Query: 206 LPDSLRLGYANLVLAMADND 225
L D + G + + D
Sbjct: 460 LTDDQKYGMIEAIAHLIHRD 479
>29933.m001441 ATATH13, putative
Length = 603
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
Query: 79 EFDFIREANAMERIRRFLYENNKRTPVVVPRVLKDMVTRRVLMMEYIDGIPILNLGNEIA 138
+ D REA + RF+Y + V P+ + +V VL+ Y G + + +E+
Sbjct: 344 QVDLAREA---AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGESVSHFVDEL- 399
Query: 139 KRGIDP-RGKVAAAAKQNILKSLTLAYGQMILKSGFFHADPHPGNILI-CKGSEASR--- 193
G D + +A +LK M+L F HAD HPGNIL+ +++SR
Sbjct: 400 -EGHDRIKSALAHIGTHALLK--------MLLVDNFIHADMHPGNILVRMSQNKSSRKGI 450
Query: 194 -----HVALLDYGQVKDLPDSLRLGYANLVLAMADNDPIKASESYRELGIGTLSSCEN 246
HV LD G +L S R+ ++A D A+E L + +C N
Sbjct: 451 FKSKPHVVFLDVGMTAELSRSDRVNLLEFFKSVARRDGRTAAEC--ALRLSKQQNCPN 506