Jatropha Genome Database

JcCB0049461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0049461.10 - phase: 0 /partial
         (210 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29827.m002590 conserved hypothetical protein                          348   1e-96
29848.m004543 DNA binding protein, putative                           286   3e-78
29696.m000106 actin binding protein, putative                         281   1e-76
30138.m004035 conserved hypothetical protein                          265   8e-72
29661.m000911 conserved hypothetical protein                          116   6e-27
27866.m000235 conserved hypothetical protein                          108   3e-24
30156.m001720 conserved hypothetical protein                          104   3e-23
28166.m001048 actin binding protein, putative                         100   8e-22
28060.m000068 conserved hypothetical protein                           99   2e-21
29736.m002101 actin binding protein, putative                          97   5e-21
30128.m008817 conserved hypothetical protein                           96   9e-21
30147.m014022 actin binding protein, putative                          89   1e-18

>29827.m002590 conserved hypothetical protein
          Length = 231

 Score =  348 bits (893), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 168/175 (96%), Positives = 172/175 (98%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSS+LDIDQVENLIKFCPTKEEMETLKNYT
Sbjct: 49  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSALDIDQVENLIKFCPTKEEMETLKNYT 108

Query: 83  GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
           GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFS+QVDDLRCNL TIN+A REVKES 
Sbjct: 109 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSSQVDDLRCNLKTINDATREVKESV 168

Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
           KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK+
Sbjct: 169 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKL 223


>29848.m004543 DNA binding protein, putative
          Length = 1266

 Score =  286 bits (733), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 131/175 (74%), Positives = 158/175 (90%)

Query: 23   VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
            ++LRRAYNCEIML+K+K+PL ++++A+LA+D S LD+DQV+NLIKFCPTKEEME LK Y+
Sbjct: 923  IELRRAYNCEIMLSKVKIPLSDLMSAILAMDDSVLDVDQVDNLIKFCPTKEEMELLKGYS 982

Query: 83   GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
            GDK+ LGKCEQFFLELMKVPRVE+KLRVF+F++ F  QV DLR NLN +N+AA EV+ S 
Sbjct: 983  GDKDNLGKCEQFFLELMKVPRVESKLRVFSFKLQFHPQVSDLRRNLNVVNSAAEEVRSSR 1042

Query: 143  KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
            KL++IMQTIL+LGNALN GTARGSAVGF+LDSLLKL+DTRA NNKMTLMHYLCKV
Sbjct: 1043 KLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRAINNKMTLMHYLCKV 1097


>29696.m000106 actin binding protein, putative
          Length = 1191

 Score =  281 bits (720), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 127/175 (72%), Positives = 160/175 (91%)

Query: 23   VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
            ++ RRAYNCEIML+K+KVPL E++++VLAL+ ++LD+DQ+ENLIKFCPTKEEME LK Y 
Sbjct: 852  IEHRRAYNCEIMLSKVKVPLNELMSSVLALEDTALDVDQLENLIKFCPTKEEMELLKGYI 911

Query: 83   GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
            G+KE LGKCEQFFLELM+VPRVE+KLRVF+F++ F +QV DLR +LN +N+ A E++ SA
Sbjct: 912  GEKEKLGKCEQFFLELMQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSA 971

Query: 143  KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
            KL+++MQTIL+LGNALNQGTARGSA+GF+LDSLLKL+DTRARNNK+TLMHYLCKV
Sbjct: 972  KLKKVMQTILSLGNALNQGTARGSAIGFRLDSLLKLTDTRARNNKITLMHYLCKV 1026


>30138.m004035 conserved hypothetical protein
          Length = 1550

 Score =  265 bits (678), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 124/174 (71%), Positives = 153/174 (87%)

Query: 23   VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
            +DLRRA N EIMLTK+K+PL +M+ AVLA+D S LD DQVENLIKFCPTKEEME LKNY+
Sbjct: 1218 IDLRRANNTEIMLTKVKMPLSDMMAAVLAMDESILDADQVENLIKFCPTKEEMELLKNYS 1277

Query: 83   GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
            GDKE LGKCEQ+FLELMKVPRVE+KLRVF+F+I F++Q+ + + +LNT+N+A  EV+ S 
Sbjct: 1278 GDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFNSQISEFKKSLNTVNSACEEVRSSL 1337

Query: 143  KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
            KL++IM+ IL LGN LNQGTARGSA+GFKLDSLLKL+DTRA N+KMTLMH++C+
Sbjct: 1338 KLKEIMRFILILGNTLNQGTARGSAIGFKLDSLLKLTDTRASNSKMTLMHFVCR 1391


>29661.m000911 conserved hypothetical protein
          Length = 903

 Score =  116 bits (291), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 60/174 (34%), Positives = 99/174 (56%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D +++ N  I+L  + V   E+  A+L  +  SL  + +E L+K  PTKEE   L+ Y+
Sbjct: 530 LDPKKSQNIAILLRALNVTRDEVSEALLDGNPESLGAELLETLVKMAPTKEEEIKLREYS 589

Query: 83  GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
           GD   LG  E+F   ++ +P    ++    +R  F T+V  LR +  T+  A+ E+K S 
Sbjct: 590 GDTSKLGSAERFLKAVLDIPFAFRRVEAMLYRANFDTEVKYLRKSFQTLEVASEELKNSR 649

Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
              ++++ +L  GN +N GT RG A  FKLD+LLKL D +  + K TL+H++ +
Sbjct: 650 LFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQ 703


>27866.m000235 conserved hypothetical protein
          Length = 1140

 Score =  108 bits (269), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 57/175 (32%), Positives = 99/175 (56%), Gaps = 1/175 (0%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D ++A N  I+L  + V + E+  A+L  ++ +L  + +E+L+K  PTKEE   LK Y 
Sbjct: 763 LDPKKAQNIAILLRALNVTIEEVCEALLEGNTETLGTELLESLLKMAPTKEEERKLKEYK 822

Query: 83  GDKEM-LGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
            D    LG  E+F   ++ VP    ++    +   F ++V+ L+ +  T+  A  E++ S
Sbjct: 823 DDSPTKLGHAEKFLKAVLDVPFAFKRVDAMLYITNFESEVEYLKRSFETLEAACEELRNS 882

Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
               ++++ +L  GN +N GT RG A  FKLD+LLKL D +  + K TL+H++ +
Sbjct: 883 RMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQ 937


>30156.m001720 conserved hypothetical protein
          Length = 892

 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 104/182 (57%), Gaps = 2/182 (1%)

Query: 15  PGFCFLLQVDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEE 74
           P F ++  +D R+A N  I+L  + V   E+++A+   + + L  + ++ L+K  PT EE
Sbjct: 490 PSFQYIQIIDTRKAQNLSILLRALNVTTEEVLDALR--EGTELPAELLQTLLKMAPTSEE 547

Query: 75  METLKNYTGDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNA 134
              L+ +TGD   LG  E+F   L+++P    ++    F  +   ++  L+ +L T+  A
Sbjct: 548 ELKLRLFTGDISQLGPAERFLKILVELPFAFKRMESLLFMSSLQEELSTLKESLATLEVA 607

Query: 135 AREVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYL 194
           + +++ S    ++++ +L  GN +N GT RG A  FKLD+LLKLSD +  + K TL+H++
Sbjct: 608 SDKLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFV 667

Query: 195 CK 196
            +
Sbjct: 668 VQ 669


>28166.m001048 actin binding protein, putative
          Length = 965

 Score = 99.8 bits (247), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 105/186 (56%), Gaps = 2/186 (1%)

Query: 11  TTKLPGFCFLLQVDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCP 70
           +++ P   ++  +D ++A N  I+L  + V + E+ +A+   + + L ++ ++ L+K  P
Sbjct: 561 SSQEPSTQYIQILDTKKAQNLSILLRALNVTIEEVCDALR--EGNELPVELLQTLLKMAP 618

Query: 71  TKEEMETLKNYTGDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNT 130
           T +E   L+ ++G+   LG  E+F   L+++P    +L    F  T   +V   + +  T
Sbjct: 619 TADEELKLRVFSGELSQLGPAERFLKALVEIPFAYKRLEALLFMCTLQEEVTTTKESFET 678

Query: 131 INNAAREVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTL 190
           +  A +E++ S    ++++ +L  GN +N GT RG A  FKLD+LLKL+D +  + K TL
Sbjct: 679 LEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGADGKTTL 738

Query: 191 MHYLCK 196
           +H++ +
Sbjct: 739 LHFVVQ 744


>28060.m000068 conserved hypothetical protein
          Length = 411

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 98/175 (56%), Gaps = 1/175 (0%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D +++ N  I+L  + V + E+  A+L  +S +L  + +E+L+K  PTKEE   L+ Y 
Sbjct: 29  LDSKKSQNIAILLRALNVTIDEVCEALLEGNSDTLGTELLESLLKMAPTKEEERKLREYK 88

Query: 83  GDKEM-LGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
            +    LG  E+F   ++ +P    ++    +   F ++V+ L+ +   +  A  E++ S
Sbjct: 89  DESPFKLGPAEKFLKAVLDIPFAFKRVDAMLYIANFESEVEYLQRSFENLEAACEELRNS 148

Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
               ++++ +L  GN +N GT RG A  FKLD+LLKL D +  + K TL+H++ +
Sbjct: 149 RMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGTDGKTTLLHFVVQ 203


>29736.m002101 actin binding protein, putative
          Length = 849

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 96/175 (54%), Gaps = 3/175 (1%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D R++ N  I+L  + +   E+ +A+   +   L+ + +E +++  PTKEE   +  + 
Sbjct: 450 LDSRKSQNIAIVLKSLGISRSELFDALT--NGHGLNAETLERVMRIAPTKEEESQILEFD 507

Query: 83  GDKEMLGKCEQFFLELMK-VPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
           GD   L   E F   L+K VP   A+L    FR+ + +++     +L T+    +E++  
Sbjct: 508 GDTSRLADAESFLYHLLKAVPSAFARLDAMLFRLNYDSEILQYEDSLQTLELGCKELRNR 567

Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
               ++++ IL  GN +N GT+RG+A  F L SL KLSD ++ + K TL+H++ +
Sbjct: 568 GLFVKLLEAILKAGNRMNAGTSRGNAQAFNLTSLQKLSDVKSTDGKTTLLHFIVE 622


>30128.m008817 conserved hypothetical protein
          Length = 987

 Score = 96.3 bits (238), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 2/171 (1%)

Query: 26  RRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYTGDK 85
           +R  N  I+   + +   ++  A++    + L + Q+E L K  PTKEE   L  Y G+ 
Sbjct: 642 KRLQNLTILSKALNLTPEQLCEALIR--GNGLSLQQLEALAKMVPTKEEETKLAEYKGNV 699

Query: 86  EMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESAKLR 145
             LG  E+F    + +P    ++    +R TF  +V  LR + + +  A +E++ +    
Sbjct: 700 NELGSAEKFVKVALTLPFAFVRVEAMLYRETFEDEVVHLRNSFSMLEEACKELRSNRLFL 759

Query: 146 QIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
           ++++ +L  GN +N GT RG A  FKLD+LLKL+D +  + + TL+H++ +
Sbjct: 760 KLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGRTTLLHFVVQ 810


>30147.m014022 actin binding protein, putative
          Length = 702

 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 93/172 (54%), Gaps = 3/172 (1%)

Query: 26  RRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYTGDK 85
           R++ N  I+L  + V   E++ A++  D   L  D +E L +  PT+EE   +  + G+ 
Sbjct: 308 RKSQNTAIVLKSLAVSRKEILAALV--DGHGLTTDALEKLNRIAPTQEEEAKILQFRGNP 365

Query: 86  EMLGKCEQFFLELMK-VPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESAKL 144
             L   E F   ++K VP    ++    FR  +  ++  L+ +L ++    +E++     
Sbjct: 366 SKLTDAESFLYHILKAVPSAFIRINAMLFRSNYDAEILHLKESLQSLELGCKELRRRGLF 425

Query: 145 RQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
            ++++ IL  GN +N GT+RG+A GF L +L ++SD ++ + K TL+H++ +
Sbjct: 426 LKLLEAILKAGNRMNAGTSRGNAQGFNLAALRRISDVKSTDGKTTLLHFVVE 477