Jatropha Genome Database

JcCB0047491.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0047491.20 + phase: 0 /partial
         (319 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29633.m000917 glycerol-3-phosphate dehydrogenase, putative            521   e-148
29729.m002373 glycerol-3-phosphate dehydrogenase, putative            107   1e-23
29344.m000105 glycerol-3-phosphate dehydrogenase, putative             55   3e-08
30131.m007256 glycerol-3-phosphate dehydrogenase, putative             52   3e-07

>29633.m000917 glycerol-3-phosphate dehydrogenase, putative
          Length = 380

 Score =  521 bits (1341), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 255/287 (88%), Positives = 270/287 (94%), Gaps = 5/287 (1%)

Query: 13  QESAPSNTFTINDGSGAASGAFHMSKVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMW 72
           QE+AP +TF+ ND + A+    HMSKVTVVGSGNWG+VAAKLIASNTLKL  FHDEVRMW
Sbjct: 11  QETAPRSTFS-NDSAAAS----HMSKVTVVGSGNWGTVAAKLIASNTLKLNYFHDEVRMW 65

Query: 73  VFEEALPSGEKLTDVINRTNENVKYLPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFM 132
           VFEE LPSGEKL+DVINRTNENVKYLPGIKLGKNV+ADPD+DNAV+DANMLVFVTPHQFM
Sbjct: 66  VFEETLPSGEKLSDVINRTNENVKYLPGIKLGKNVIADPDIDNAVKDANMLVFVTPHQFM 125

Query: 133 EGICKRLVGKIKEGVEAISLIKGMEVKMEGPCMISSLISSQLRVNCCVLMGANIANEIAV 192
           +GICKRLV KIK+GVEAISLIKGMEVKMEGPCMISSLIS QL VNCCVLMGANIANEIAV
Sbjct: 126 DGICKRLVRKIKDGVEAISLIKGMEVKMEGPCMISSLISEQLGVNCCVLMGANIANEIAV 185

Query: 193 EKFSEATVGYKGNREIAEKWVQLFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGL 252
           EKFSEATVG++ NREIAEKWVQLFSTPYFMVT VQDVEGVELCGTLKNVVALAAGFVDGL
Sbjct: 186 EKFSEATVGFRTNREIAEKWVQLFSTPYFMVTAVQDVEGVELCGTLKNVVALAAGFVDGL 245

Query: 253 EMGNNTKAAIMRIGLREMRAFSKLLFSSVKDSTFFESCGVADVITTC 299
           EMGNNTKAA+MRIGLREMRA SKLLFSSVKDSTFFESCGVADVITTC
Sbjct: 246 EMGNNTKAAMMRIGLREMRALSKLLFSSVKDSTFFESCGVADVITTC 292


>29729.m002373 glycerol-3-phosphate dehydrogenase, putative
          Length = 410

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 19/266 (7%)

Query: 37  SKVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTNENVK 96
           +KV V+G G++G+  A  +A+   +L     EV M + +  +         IN  + N K
Sbjct: 78  NKVAVLGGGSFGTAMAAHVANRKSEL-----EVHMLLRDSFV------CQSINENHCNCK 126

Query: 97  YLPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISLIKGM 156
           Y P  KL  NV+A  D  +A+  A+  +   P QF     + +   +  G+  ISL KG+
Sbjct: 127 YFPQHKLPDNVIATTDPKSALLGADYCLHAVPVQFSSSFLEGIAEFVDPGLPFISLSKGL 186

Query: 157 EVKMEGPCMISSLISSQL---RVNCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKWV 213
           E+      M+S +I   L   R     L G + A E+ + K   A V    ++++A+   
Sbjct: 187 ELNTLR--MMSQIIPQALNNPRQPFIALSGPSFALEL-MNKLPTAMVVASKDKKLADAAQ 243

Query: 214 QLFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLREMRAF 273
           QL ++ +  ++   DV GVE+ G LKNV+A+AAG V+G+ +GNN+ AA++  G  E+R  
Sbjct: 244 QLLASSHLRISTSSDVTGVEIAGALKNVLAIAAGIVEGMNLGNNSMAALVAQGCSEIRWL 303

Query: 274 SKLLFSSVKDSTFFESCGVADVITTC 299
           +  +    K +T     G  D++ TC
Sbjct: 304 ATKM--GAKPATITGLSGTGDIMLTC 327


>29344.m000105 glycerol-3-phosphate dehydrogenase, putative
          Length = 466

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 130/301 (43%), Gaps = 76/301 (25%)

Query: 18  SNTFTINDGSGAASGA-------FHMS--------KVTVVGSGNWGSVAAKLIASNTLKL 62
            N ++I +G+G  SG         H+         ++  VG+G WGSV A L+  +    
Sbjct: 12  QNGWSIQNGNGNGSGLEEKLDELRHLLGKADGDPLRIAGVGAGAWGSVFAALLQDS---Y 68

Query: 63  TSFHDEVRMWVFEEA-----LPSGEKLTDVINRTNENVK-------YLPGI--KLGK--- 105
           + F D+V++ ++          + E L +VIN   + ++       YL  +  +LG    
Sbjct: 69  SQFRDKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTL 128

Query: 106 ------------NVVADP--------DLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKE 145
                       N++  P        +L  AV DA+++V   P      + + +    KE
Sbjct: 129 FADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETLEVFEEISQYWKE 188

Query: 146 GVEA---ISLIKGMEVKMEG-PCMIS--SLISSQLRV---NCCVLMGANIANEIAVEKFS 196
            +     ISL KG+E  +E  P +I+   +I+    V   N   L G NIA+EI  ++++
Sbjct: 189 RITVPIIISLAKGVEAALEPVPHIITPTQMINRATGVSMENILYLGGPNIASEIYNKEYA 248

Query: 197 EATV-GYKGNREIAEKW----VQLFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDG 251
            A + G       A+KW     +    P+F+V    D+   E+ G LKNV A+ AG V  
Sbjct: 249 NARICG-------ADKWRKPLAKFLRQPHFIVWDNSDLITHEVMGGLKNVYAIGAGMVAA 301

Query: 252 L 252
           L
Sbjct: 302 L 302


>30131.m007256 glycerol-3-phosphate dehydrogenase, putative
          Length = 467

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 61/266 (22%)

Query: 38  KVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLT------------ 85
           ++  VG+G WGSV   L+  +   L    D+V + ++     S ++ T            
Sbjct: 47  RIVGVGAGAWGSVFTALLQDSYGHL---RDKVLIRLWRRPGKSVDRATAEHLFEVINSRE 103

Query: 86  DVINRTNENVKYLPGI--KLGK---------------NVVADP--------DLDNAVRDA 120
           DV+ R      YL  +  +LG                N++  P        +L  AV DA
Sbjct: 104 DVLRRLIRRCAYLKYVEARLGDRTLYADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDA 163

Query: 121 NMLVFVTPHQFMEGICKRLVGKIKEGVEA---ISLIKGMEVKMEG-PCMIS--SLISSQL 174
           ++++   P      + +++    KE +     ISL KG+E ++E  P +I+   +I+   
Sbjct: 164 DIVINGLPSTETSEVFQQISRYWKERITVPVIISLAKGIEAELEPEPRIITPTQMINRAT 223

Query: 175 RV---NCCVLMGANIANEIAVEKFSEATV-GYKGNREIAEKW----VQLFSTPYFMVTPV 226
            V   N   L G NIA+EI  ++++ A + G       AEKW     +    P+F+V   
Sbjct: 224 GVPMENILYLGGPNIASEIYNKEYANARICG-------AEKWRKPLAKFLRQPHFIVWDN 276

Query: 227 QDVEGVELCGTLKNVVALAAGFVDGL 252
            D+   E+ G LKNV A+ AG V  L
Sbjct: 277 SDLVTHEVMGGLKNVYAIGAGMVAAL 302