Jatropha Genome Database

JcCB0047491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0047491.10 + phase: 0 /partial
         (153 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29633.m000915 t21p5.16 protein, putative                              262   4e-71

>29633.m000915 t21p5.16 protein, putative
          Length = 187

 Score =  262 bits (670), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 123/153 (80%), Positives = 132/153 (86%)

Query: 1   LREHLEKAGCGVEENLIKAINCDXXXXXXXXXXXXXXVCSNHMNIQDEVNQVVIHELIHA 60
           LREHLEKAGCG+ +N IKA+NC+              VCSNHMN+QDEVNQVVIHELIHA
Sbjct: 35  LREHLEKAGCGIGDNFIKAVNCEKKMSGGYVSGDGIVVCSNHMNMQDEVNQVVIHELIHA 94

Query: 61  YDDCRAKNLDWANCAHHACSEIRASHLSGDCHYKRELLRGYMKMRGHGQECVKRRAMKSV 120
           YDDCRA NLDWANC HHACSEIRA HLSGDCHYKRELLRGYMK+RGH QECV+RR MKS+
Sbjct: 95  YDDCRAANLDWANCVHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQECVRRRVMKSM 154

Query: 121 IANPYCSEAAAKDAVEAVWDVCYNDTKPFDRAP 153
           IANPYCSEAAAKDA+EAVWDVCYNDTKPFDRAP
Sbjct: 155 IANPYCSEAAAKDAMEAVWDVCYNDTKPFDRAP 187