Jatropha Genome Database

JcCB0045301.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0045301.20 + phase: 2 /pseudo/partial
         (106 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28438.m000050 cytochrome P450, putative                                88   1e-18
30167.m000871 conserved hypothetical protein                           62   8e-11
29910.m000917 cytochrome P450, putative                                59   4e-10
29910.m000911 cytochrome P450, putative                                59   5e-10
29910.m000914 cytochrome P450, putative                                55   8e-09
29910.m000910 conserved hypothetical protein                           55   8e-09
29910.m000920 conserved hypothetical protein                           52   4e-08

>28438.m000050 cytochrome P450, putative
          Length = 338

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/50 (66%), Positives = 45/50 (90%)

Query: 57  VMGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCPITASD 106
           ++GN+PEM+ YRPTFRW++Q M+EM T+ICLIRLGRTN++PV+CPI A +
Sbjct: 64  LVGNLPEMMLYRPTFRWIHQLMQEMNTEICLIRLGRTNIVPVSCPILARE 113


>30167.m000871 conserved hypothetical protein
          Length = 213

 Score = 61.6 bits (148), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 4/59 (6%)

Query: 47  SKNLPVPP----WPVMGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCP 101
           +K L +PP    WPV+G +  M+  RPTFRW+++ M+EM T I  IRLG  +VIPV  P
Sbjct: 67  AKQLSLPPGPKLWPVVGCLRPMLTNRPTFRWIHKLMEEMNTGIACIRLGNVHVIPVTSP 125


>29910.m000917 cytochrome P450, putative
          Length = 329

 Score = 58.9 bits (141), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/44 (52%), Positives = 32/44 (72%)

Query: 58  MGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCP 101
           +G +P M+  +PTFRW+++ MKEM T+I  IRLG  +VIPV  P
Sbjct: 60  VGCLPTMLANKPTFRWIHKLMKEMNTEIACIRLGNVHVIPVTSP 103


>29910.m000911 cytochrome P450, putative
          Length = 390

 Score = 58.9 bits (141), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/44 (52%), Positives = 32/44 (72%)

Query: 58  MGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCP 101
           +G +P M+  +PTFRW+++ MKEM T+I  IRLG  +VIPV  P
Sbjct: 73  VGCLPTMLANKPTFRWIHKLMKEMNTEIACIRLGNVHVIPVTSP 116


>29910.m000914 cytochrome P450, putative
          Length = 370

 Score = 55.1 bits (131), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 31/44 (70%)

Query: 58  MGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCP 101
           +G +P M+  +PT RW+++ M+EM T+I  IRLG  +VIPV  P
Sbjct: 82  VGCLPTMLANKPTIRWIHKLMEEMNTEIACIRLGNVHVIPVTSP 125


>29910.m000910 conserved hypothetical protein
          Length = 245

 Score = 54.7 bits (130), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 31/44 (70%)

Query: 58  MGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCP 101
           +G +P M+   PTF+W++  MKEMKT+I  IRLG  +VIPV  P
Sbjct: 105 VGCLPTMLTNEPTFQWIHNLMKEMKTEIACIRLGNVHVIPVTSP 148


>29910.m000920 conserved hypothetical protein
          Length = 265

 Score = 52.4 bits (124), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 30/44 (68%)

Query: 58  MGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCP 101
           +G +P M+  +PT RW+   MKEMKT+I  IRLG  +VIPV  P
Sbjct: 82  VGCLPAMLTNKPTVRWIDNLMKEMKTEIACIRLGNVHVIPVTSP 125