Jatropha Genome Database

JcCB0045051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0045051.10 + phase: 0 /partial
         (143 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29854.m001093 aldehyde oxidase, putative                              187   1e-48
29854.m001100 aldehyde oxidase, putative                              182   5e-47
29854.m001095 aldehyde oxidase, putative                               92   8e-20
29854.m001099 aldehyde oxidase, putative                               62   1e-10
29854.m001090 aldehyde oxidase, putative                               60   4e-10
30169.m006431 xanthine dehydrogenase, putative                         58   1e-09

>29854.m001093 aldehyde oxidase, putative
          Length = 1366

 Score =  187 bits (475), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/143 (65%), Positives = 104/143 (72%), Gaps = 1/143 (0%)

Query: 1   MEEERETGNKNSLVFAVNGKRFELSSVDPSTTLLEFLRTQTSFKSXXXXXXXXXXXXXXX 60
           +E  R++ N N LVFAVNGKRFELS++DPSTTLLEFLR+QT FKS               
Sbjct: 3   LERSRKSDNHN-LVFAVNGKRFELSNIDPSTTLLEFLRSQTPFKSVKLSCGEGGCGACIV 61

Query: 61  XXSKYNPVLDQVEDXXXXXXXXXXXXINRASITTSEGLGNSKDGFHSIHQRFSGFHASQC 120
             SKY+PV DQVED            IN  S+TTSEGLGNSKDGFHSIHQRF+GFHASQC
Sbjct: 62  LLSKYDPVRDQVEDFTVSSCLTLLCSINGCSVTTSEGLGNSKDGFHSIHQRFAGFHASQC 121

Query: 121 GFCTPGMCMSLFGALVKAEKTDR 143
           GFCTPGMC+SLFGALVKAEK DR
Sbjct: 122 GFCTPGMCISLFGALVKAEKADR 144


>29854.m001100 aldehyde oxidase, putative
          Length = 1370

 Score =  182 bits (462), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 91/146 (62%), Positives = 103/146 (70%), Gaps = 3/146 (2%)

Query: 1   MEEERETGN---KNSLVFAVNGKRFELSSVDPSTTLLEFLRTQTSFKSXXXXXXXXXXXX 57
           ME+   T     +++L+FAVNG+RFELSSVDPSTTLLEFLRTQT FKS            
Sbjct: 1   MEDHESTATETERSNLLFAVNGERFELSSVDPSTTLLEFLRTQTRFKSVKLSCGEGGCGA 60

Query: 58  XXXXXSKYNPVLDQVEDXXXXXXXXXXXXINRASITTSEGLGNSKDGFHSIHQRFSGFHA 117
                SKY+P  D+VED            IN  SITTSEGLGNSKDGFHSIHQRF+GFHA
Sbjct: 61  CIALLSKYDPFSDEVEDFTVSSCLTLLCSINGCSITTSEGLGNSKDGFHSIHQRFTGFHA 120

Query: 118 SQCGFCTPGMCMSLFGALVKAEKTDR 143
           SQCGFCTPG+C+SL+GALV AEKTDR
Sbjct: 121 SQCGFCTPGICISLYGALVNAEKTDR 146


>29854.m001095 aldehyde oxidase, putative
          Length = 1223

 Score = 92.0 bits (227), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 48/81 (59%), Positives = 52/81 (64%), Gaps = 20/81 (24%)

Query: 63  SKYNPVLDQVEDXXXXXXXXXXXXINRASITTSEGLGNSKDGFHSIHQRFSGFHASQCGF 122
           SKY+P LDQVED                   T + + N   G HSIHQRF+GFHASQCGF
Sbjct: 11  SKYDPELDQVEDF------------------TCKYMFNY--GLHSIHQRFAGFHASQCGF 50

Query: 123 CTPGMCMSLFGALVKAEKTDR 143
           CTPGMCMSLFGALV AEKT R
Sbjct: 51  CTPGMCMSLFGALVNAEKTAR 71


>29854.m001099 aldehyde oxidase, putative
          Length = 56

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 38/46 (82%), Gaps = 1/46 (2%)

Query: 1  MEEERE-TGNKNSLVFAVNGKRFELSSVDPSTTLLEFLRTQTSFKS 45
          MEEE+E   N +SLVFAVNG+RFELSSV  STT+LEFLRT T FKS
Sbjct: 1  MEEEKEREKNSSSLVFAVNGQRFELSSVISSTTVLEFLRTHTPFKS 46


>29854.m001090 aldehyde oxidase, putative
          Length = 56

 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 33/44 (75%)

Query: 2  EEERETGNKNSLVFAVNGKRFELSSVDPSTTLLEFLRTQTSFKS 45
          EE  +   K  LVFA+NG RFELSSV PSTTLL FLRT T+FKS
Sbjct: 3  EERSKAKEKYQLVFAINGVRFELSSVHPSTTLLHFLRTDTAFKS 46


>30169.m006431 xanthine dehydrogenase, putative
          Length = 1366

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 2/139 (1%)

Query: 2   EEERETGNKNSLVFAVNGKRFELSSVDPSTTLLEFLRTQTSFKSXXXXXXXXXXXXXXXX 61
           E E E   K ++++ VNG R  L       TL+E+LR                       
Sbjct: 7   EGEIEESAKEAILY-VNGVRRVLPDGLAHLTLIEYLR-DIGLTGTKLGCGEGGCGACTVM 64

Query: 62  XSKYNPVLDQVEDXXXXXXXXXXXXINRASITTSEGLGNSKDGFHSIHQRFSGFHASQCG 121
            S Y+  L++               +    + T EG+GN K G H I +  +  H SQCG
Sbjct: 65  VSYYDRKLNKCVHYAINACLAPLYSVEGMHVITVEGVGNRKSGLHPIQESLARGHGSQCG 124

Query: 122 FCTPGMCMSLFGALVKAEK 140
           FCTPG  MS++  L  +++
Sbjct: 125 FCTPGFIMSMYALLRSSQE 143