Jatropha Genome Database

JcCB0044721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0044721.10 - phase: 0 
         (304 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002291 metal ion binding protein, putative                     251   2e-67
29589.m001234 metal ion binding protein, putative                      96   3e-20
30147.m014470 metal ion binding protein, putative                      72   3e-13
29764.m000754 copper ion binding protein, putative                     69   3e-12
29589.m001258 conserved hypothetical protein                           62   3e-10
27785.m000033 metal ion binding protein, putative                      62   4e-10
28962.m000456 metal ion binding protein, putative                      56   2e-08
29844.m003310 chloroplast-targeted copper chaperone, putative          51   6e-07
27999.m000063 chloroplast-targeted copper chaperone, putative          50   9e-07
30128.m008744 chloroplast-targeted copper chaperone, putative          50   1e-06
29709.m001232 metal ion binding protein, putative                      50   2e-06

>30078.m002291 metal ion binding protein, putative
          Length = 345

 Score =  251 bits (642), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/312 (47%), Positives = 162/312 (51%), Gaps = 18/312 (5%)

Query: 1   MDMHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEIV 60
           +DMHCEGCAKK R AVK LEGVE VKTDCEGNKLTVTGKVDP KVKARLEEKTKKKV+I+
Sbjct: 44  IDMHCEGCAKKFRSAVKRLEGVEAVKTDCEGNKLTVTGKVDPAKVKARLEEKTKKKVDII 103

Query: 61  SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVLKIRTHCDGCXXXXXXXXX 120
           S                                     TVVLKIRTHCDGC         
Sbjct: 104 SPLPKKDGGGEKKPEEKKPEEKKPEEKKPPKES-----TVVLKIRTHCDGCVSKMKKIIV 158

Query: 121 XXXXXXNVTVDGAKDLVTVTGTMDVKELAPYLTEKLKRNXXX---XXXXXXXXXXXXXXX 177
                 +V+VD  KDL+TV GTMDV  + PYL  KLKR                      
Sbjct: 159 KIKGVDSVSVDAPKDLLTVKGTMDVNTMVPYLNAKLKRTVEVVPPKKDEPKKEGGGGGGE 218

Query: 178 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSKMEYYPAPAPTHWFDGMFGQS 237
                                              MEVSK+EY+PAPAPTHW DG+FG S
Sbjct: 219 AKTEKKEGGGEAKGEKKEGDGGKKDAPAPAAEPPKMEVSKLEYFPAPAPTHWLDGVFGHS 278

Query: 238 YAVEPHHGSYAVNQGYYPVN-QGY-PMMNHXX---XXXXXXXXXXXMEPMYNHPMHAPQM 292
           Y+ EPHH      QGYYPVN Q Y P+MNH                MEPMYNHPMHAPQM
Sbjct: 279 YSAEPHH-----QQGYYPVNHQAYNPVMNHGSYGYVQQGYVQQGYVMEPMYNHPMHAPQM 333

Query: 293 FSDENPNSCSVM 304
           FS+ENPN+CS+M
Sbjct: 334 FSEENPNACSIM 345


>29589.m001234 metal ion binding protein, putative
          Length = 358

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 76/162 (46%), Gaps = 4/162 (2%)

Query: 1   MDMHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEIV 60
           ++MHCEGCA K+ +  +  EGVE VK D E NKLTV GKVDP +++  L  KT+KKV+++
Sbjct: 55  IEMHCEGCASKIIKLTRGFEGVENVKADTESNKLTVIGKVDPIQIRDTLHLKTRKKVDLI 114

Query: 61  SAX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVLKIRTHCDGCXXXXX 116
           S                                         T V+K+  HC GC     
Sbjct: 115 SPQPKKDDDNNNKNKNKGDNNKDDTKKPDNADSKKQKEAPVTTAVIKVAFHCLGCIEKIH 174

Query: 117 XXXXXXXXXXNVTVDGAKDLVTVTGTMDVKELAPYLTEKLKR 158
                      +T+D  K+ VTV G+MDVK L   L E+LKR
Sbjct: 175 KILSKAKGVQEMTLDKQKETVTVKGSMDVKALTEALKERLKR 216


>30147.m014470 metal ion binding protein, putative
          Length = 349

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 6/154 (3%)

Query: 3   MHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTG-KVDPEKVKARLEEKTKKKVEIVS 61
           MHCEGCA+KVRR +K  +GVE V TDC+ +K+ V G K DP +V AR++ K+ ++VE++S
Sbjct: 81  MHCEGCARKVRRCLKGFDGVEDVITDCKSSKVVVKGEKADPLQVLARVQRKSHRQVELIS 140

Query: 62  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVLKIRTHCDGCXXXXXXXXXX 121
                                                 VVLK+  HC+ C          
Sbjct: 141 P-----IPKPPSEEEKKAAEEKEKPKPEEKKEEPPVIIVVLKVYMHCEACAMEIKKRIQR 195

Query: 122 XXXXXNVTVDGAKDLVTVTGTMDVKELAPYLTEK 155
                +   D     VTV G  D ++L  Y+ ++
Sbjct: 196 MKGVESADPDLKSSEVTVKGVFDPQKLVEYVRKR 229


>29764.m000754 copper ion binding protein, putative
          Length = 316

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 15/159 (9%)

Query: 1   MDMHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEIV 60
           +D+HC GCAKK+ R++  + GVE V  D   N++T+ G V+P+    R+ +KTK++ +++
Sbjct: 47  VDLHCAGCAKKIERSIMKIRGVEGVVMDMVQNQVTIKGIVEPQVACNRIMKKTKRRAKVL 106

Query: 61  SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVLKIRTHCDGCXXXXXXXXX 120
           S                                     TV L I  HC+ C         
Sbjct: 107 SP---------------LPEAEGEPMPQVVTSQVSRSTTVELNINMHCEACAEQLKRKIL 151

Query: 121 XXXXXXNVTVDGAKDLVTVTGTMDVKELAPYLTEKLKRN 159
                  V  + +   VTVTGTMD ++L  Y+  + K+ 
Sbjct: 152 KMRGVQTVVTELSTGKVTVTGTMDAEKLVDYVYRRTKKQ 190



 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 41/60 (68%)

Query: 1   MDMHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEIV 60
           ++MHCE CA++++R +  + GV+TV T+    K+TVTG +D EK+   +  +TKK+  IV
Sbjct: 135 INMHCEACAEQLKRKILKMRGVQTVVTELSTGKVTVTGTMDAEKLVDYVYRRTKKQARIV 194


>29589.m001258 conserved hypothetical protein
          Length = 143

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)

Query: 3  MHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEIVS 61
          MHCEGCA ++  + + L+GVE VK + + N+L V G+VDP +++  L  K KKKVE+VS
Sbjct: 18 MHCEGCASEIVHSARGLKGVERVKVNIDSNELIVVGQVDPLQIQEDLSRKIKKKVELVS 76


>27785.m000033 metal ion binding protein, putative
          Length = 154

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 41/57 (71%)

Query: 3  MHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEI 59
          + CEGC +KV+RAV+ ++GV+ V  D + NKLTV G VDP KV AR+  +T K+ E+
Sbjct: 35 IDCEGCERKVKRAVEGMKGVKQVDVDRKSNKLTVVGYVDPSKVVARVAHRTGKRAEL 91


>28962.m000456 metal ion binding protein, putative
          Length = 139

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 40/57 (70%)

Query: 3  MHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEI 59
          M CEGC KKV+++V+ ++GV  V+ + + +KLTVTG VDP KV  R+  +T K+ + 
Sbjct: 19 MDCEGCVKKVKKSVQGMKGVTNVEVERKQSKLTVTGYVDPNKVLQRVRHRTGKRADF 75


>29844.m003310 chloroplast-targeted copper chaperone, putative
          Length = 526

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 2  DMHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEIVS 61
          ++HC+GC +KV++ ++ ++GV T   D E  K+TV+G VDP  +  +L  K+ K  E+  
Sbjct: 17 NIHCDGCKQKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPAVLIKKL-AKSGKHAELWG 75

Query: 62 A 62
          A
Sbjct: 76 A 76


>27999.m000063 chloroplast-targeted copper chaperone, putative
          Length = 276

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 3  MHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEI 59
          ++CEGC +KVR+ +K +EGV +V+ D E   + V+G VDP  +  +L  K+ K+ E+
Sbjct: 21 INCEGCKEKVRKKLKRIEGVYSVEIDTENQMVIVSGSVDPSTLLRKL-VKSGKRAEL 76


>30128.m008744 chloroplast-targeted copper chaperone, putative
          Length = 537

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 4  HCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEIVSA 62
          HC+GC KK+++ +++++GV   + + E  K+TVTG  DP  +  +L EK+ K  E+  A
Sbjct: 21 HCDGCKKKIKKLLQNIDGVYNTQINAEQGKVTVTGNADPAILIKKL-EKSGKHAELWGA 78


>29709.m001232 metal ion binding protein, putative
          Length = 249

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 12/159 (7%)

Query: 1   MDMHCEGCAKKVRRAVKHLEGVETVKTDCEGNKLTVTGKVDPEKVKARLEEKTKKKVEIV 60
           +++HC+ CA+ +++ + +++GV  V  D +  ++ V G +D  K+  ++E+ +KKKVE+V
Sbjct: 23  VNLHCQQCARDIKKPLMNMQGVHNVDVDFQKAEIKVKGVIDVIKIHKQIEKWSKKKVEMV 82

Query: 61  SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVLKIRTHCDGCXXXXXXXXX 120
           S                                     T  +K+  HCD C         
Sbjct: 83  SP------------EIKIKNTGATEKKVVEQTKKAILRTTSIKVHMHCDKCENDLQNRLL 130

Query: 121 XXXXXXNVTVDGAKDLVTVTGTMDVKELAPYLTEKLKRN 159
                 +V  +     + V G ++  +L  Y+ +K+ +N
Sbjct: 131 KHEGIYSVKTNMKTQTLLVQGIIESDKLLAYIRKKVHKN 169