Jatropha Genome Database

JcCB0044081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0044081.10 - phase: 0 /pseudo/partial
         (502 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013941 Pantothenate kinase, putative                           575   e-164
29631.m001019 Pantothenate kinase, putative                           228   4e-60

>30147.m013941 Pantothenate kinase, putative
          Length = 907

 Score =  575 bits (1481), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/307 (91%), Positives = 287/307 (93%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQRGDNRTIDMLVGDIYGGMDY+KIGLSASTIASSFGKTIS+KKELEDYRPE
Sbjct: 293 SFDELLELSQRGDNRTIDMLVGDIYGGMDYNKIGLSASTIASSFGKTISEKKELEDYRPE 352

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNIGQISYLNA                 HAYTMDTISFAVHFWSKGEAQ
Sbjct: 353 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGEAQ 412

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKIS 375
           AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKIS
Sbjct: 413 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKIS 472

Query: 376 WMEKFVLKGTEITAPVPMAPPGTTGLGGFEVPSSQGRTLRSDASALNVGVLHLVPTLDVF 435
           WMEKFVLKGTEITAPVPMAPPGTTGLGGFEVPSS+G TLRSDASALN+GVLHLVPTLDVF
Sbjct: 473 WMEKFVLKGTEITAPVPMAPPGTTGLGGFEVPSSKGGTLRSDASALNIGVLHLVPTLDVF 532

Query: 436 PLLADPKMYEPNTIDLSDHKELEYWFTVLSEHMPDLVDKAVASEGGTDDAKRRGDAFARA 495
           PLL DPKMYEPNTIDLSDH ELEYWFTVLSEH+PDLVDKAVASEGGTDDAKRRGDAFARA
Sbjct: 533 PLLVDPKMYEPNTIDLSDHNELEYWFTVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARA 592

Query: 496 FSAHLAR 502
           FSAHLAR
Sbjct: 593 FSAHLAR 599



 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/80 (90%), Positives = 74/80 (92%), Gaps = 3/80 (3%)

Query: 1   MAGSLIKLVYFSRHEDRSINDKRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKINE 60
           + GSLIKLVYFSRHEDRSINDKRKKTVKERLGISNGNRRSYP+LGGRLHFVKFET KINE
Sbjct: 90  IGGSLIKLVYFSRHEDRSINDKRKKTVKERLGISNGNRRSYPVLGGRLHFVKFETSKINE 149

Query: 61  CLDFISSKQLHRGG---HRW 77
           CLDFISSKQLHRGG   H W
Sbjct: 150 CLDFISSKQLHRGGIDSHGW 169


>29631.m001019 Pantothenate kinase, putative
          Length = 414

 Score =  228 bits (582), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 116/177 (65%), Positives = 131/177 (74%), Gaps = 1/177 (0%)

Query: 197 FDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPED 256
           FDELLELS +G+NR IDMLVGDIYGG DYSK GLS++TIASSFGK +SD KELEDY+PED
Sbjct: 229 FDELLELSHQGNNRVIDMLVGDIYGGTDYSKFGLSSTTIASSFGKAVSDNKELEDYKPED 288

Query: 257 ISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQA 316
           ++ SLLRMIS NIGQISYLNA                 H+YTMDTIS AVHFWSKGEA+A
Sbjct: 289 VARSLLRMISNNIGQISYLNALRFGLKRIFFGGFFIQGHSYTMDTISVAVHFWSKGEAKA 348

Query: 317 MFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK 373
           MFLRHEGFLGALGAF SYEK  LDD  V++ + + P  A YT      PP GDL + 
Sbjct: 349 MFLRHEGFLGALGAFRSYEKRSLDDFGVNKSL-KLPENASYTADSNFNPPSGDLKDN 404



 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 3/76 (3%)

Query: 1   MAGSLIKLVYFSRHEDRS--INDKRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKI 58
           + GSLIK+VY SR+ + S  I  +   +  + L +SN N   + IL GRLHF KFET KI
Sbjct: 28  IGGSLIKVVYLSRYSNNSADIEGESSSSDDDTLVLSNVNGE-HHILEGRLHFAKFETSKI 86

Query: 59  NECLDFISSKQLHRGG 74
           N+CL+FISSK+LH GG
Sbjct: 87  NDCLEFISSKKLHLGG 102