Jatropha Genome Database

JcCB0042121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0042121.10 + phase: 0 /partial
         (434 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29839.m000427 argininosuccinate synthase, putative                    660   0.0  
29171.m000266 argininosuccinate synthase, putative                    625   e-179
46851.m000019 argininosuccinate synthase, putative                     79   3e-15

>29839.m000427 argininosuccinate synthase, putative
          Length = 492

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/380 (83%), Positives = 337/380 (88%)

Query: 13  LNLTFHGPKRDVLQHNFKVSSNAKPTISLLRLGAKRSDLQGDELVVNARDIIRTSRSKAI 72
           LNL FHG K DV   + K+SS  K      +LGAKRS+LQGD  + + R I+RT R+KA+
Sbjct: 10  LNLAFHGSKGDVFLQSHKLSSIKKSPALFQKLGAKRSELQGDAFLGSKRIILRTCRNKAV 69

Query: 73  QAVLSSDTEVETHEATKRKGLRGHLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADV 132
           QAVLSSD EVE  EATK +GLRG LNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADV
Sbjct: 70  QAVLSSDREVEFSEATKNEGLRGKLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADV 129

Query: 133 GQXXXXXXXXXXXXXXSGACQLVVKDLQEEFVKDYIFPCLRAGAIYERKYLLGTSMARPV 192
           GQ              SGACQLVVKDLQEEFV+DYIFPCLRAGAIYERKYLLGTSMARPV
Sbjct: 130 GQGLKELEGLEEKAKASGACQLVVKDLQEEFVRDYIFPCLRAGAIYERKYLLGTSMARPV 189

Query: 193 IAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIKGREDAI 252
           IAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIKGREDAI
Sbjct: 190 IAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIKGREDAI 249

Query: 253 EYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEPKKDMYMMSVDPEDAPNQPE 312
           EYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP NEPKKDMYMMSVDPE+APNQPE
Sbjct: 250 EYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYMMSVDPENAPNQPE 309

Query: 313 YVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRIDMVENRLVGMKSRGVYETPG 372
           YVEIGI SG+PVSVNGK+LSPASLLS LN+IGGRHG+GRIDMVENRLVGMKSRGVYETPG
Sbjct: 310 YVEIGIVSGLPVSVNGKQLSPASLLSHLNEIGGRHGIGRIDMVENRLVGMKSRGVYETPG 369

Query: 373 GTILYSAARELESLTLDRET 392
           GTIL++AARELESLTLDRET
Sbjct: 370 GTILFTAARELESLTLDRET 389


>29171.m000266 argininosuccinate synthase, putative
          Length = 490

 Score =  625 bits (1612), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 311/382 (81%), Positives = 327/382 (85%)

Query: 11  SSLNLTFHGPKRDVLQHNFKVSSNAKPTISLLRLGAKRSDLQGDELVVNARDIIRTSRSK 70
           SS N   H   RD    N  + S  K      +LGAKR +LQG       R I+RT ++K
Sbjct: 6   SSFNFAVHDSNRDEFLQNHNIPSIKKSPTIFKKLGAKRGELQGIAFAGTKRVILRTHQNK 65

Query: 71  AIQAVLSSDTEVETHEATKRKGLRGHLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTA 130
           AIQAVLSSD EVE  EA+K KGLRG LNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTA
Sbjct: 66  AIQAVLSSDREVEVSEASKSKGLRGQLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTA 125

Query: 131 DVGQXXXXXXXXXXXXXXSGACQLVVKDLQEEFVKDYIFPCLRAGAIYERKYLLGTSMAR 190
           DVGQ              SGACQLVVKDLQEEFV+DYIFPCLRAGAIYERKYLLGTSMAR
Sbjct: 126 DVGQGLKELEGLEEKAKASGACQLVVKDLQEEFVRDYIFPCLRAGAIYERKYLLGTSMAR 185

Query: 191 PVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIKGRED 250
           PVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIKGRED
Sbjct: 186 PVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIKGRED 245

Query: 251 AIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEPKKDMYMMSVDPEDAPNQ 310
           AIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP NEP KDMYMMSVDPEDAPNQ
Sbjct: 246 AIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPNKDMYMMSVDPEDAPNQ 305

Query: 311 PEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRIDMVENRLVGMKSRGVYET 370
           PEY+EIGI SG+PVSVNGK+LS ASLLS+LN+IGGRHG+GRIDMVENRLVGMKSRGVYET
Sbjct: 306 PEYIEIGIVSGLPVSVNGKQLSSASLLSQLNEIGGRHGIGRIDMVENRLVGMKSRGVYET 365

Query: 371 PGGTILYSAARELESLTLDRET 392
           PGGTIL++AARELESLTLDRET
Sbjct: 366 PGGTILFTAARELESLTLDRET 387


>46851.m000019 argininosuccinate synthase, putative
          Length = 105

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)

Query: 89  KRKGLRGHLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQXXXXXXXXXXXXXX 148
           +RK +   L KVVLAYSGGLDTS+I+ WL++ YGCEVV FTA++GQ              
Sbjct: 28  RRKPMSKKLKKVVLAYSGGLDTSIILKWLQQTYGCEVVTFTANLGQGEELEPARRKAEQL 87

Query: 149 SGACQLVVKDLQEEFVKDY 167
            GA  + ++D++EEFV+D+
Sbjct: 88  -GATDIRIEDVREEFVRDF 105