Jatropha Genome Database

JcCB0041831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041831.10 - phase: 0 /partial
         (258 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005289 Protein bem46, putative                                 301   3e-82
30147.m013829 Protein bem46, putative                                  62   3e-10
28202.m000134 Protein bem46, putative                                  57   1e-08
29633.m000918 Protein bem46, putative                                  56   2e-08
59930.m000027 Protein bem46, putative                                  55   4e-08
29737.m001230 Protein bem46, putative                                  54   6e-08
29726.m003920 catalytic, putative                                      50   8e-07

>29912.m005289 Protein bem46, putative
          Length = 230

 Score =  301 bits (770), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 143/151 (94%), Positives = 150/151 (99%)

Query: 3   GPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGIAKDAQAAL 62
           GPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGI KDAQAAL
Sbjct: 80  GPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGITKDAQAAL 139

Query: 63  DYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLPFL 122
           D+L+QRTDID+SRIVVFGRSLGGAVGALLTK+NPDKVAGLILENTFTSILDMAGVLLPFL
Sbjct: 140 DHLSQRTDIDTSRIVVFGRSLGGAVGALLTKSNPDKVAGLILENTFTSILDMAGVLLPFL 199

Query: 123 KWFIGSNHSKGPKILNFLVRSPWSTVDVIGQ 153
           KWFIGSNHSKGP+ILNFLVRSPWST+DVIG+
Sbjct: 200 KWFIGSNHSKGPRILNFLVRSPWSTIDVIGE 230


>30147.m013829 Protein bem46, putative
          Length = 371

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 23/180 (12%)

Query: 1   IAGPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGIAKDAQA 60
           +A  T+L+   NA +I    E+   +   L  N+    Y GYG S G PS+H    D +A
Sbjct: 66  MATSTLLYSHGNAADIGQMYELFIELSIHLRVNLMGYDYSGYGQSSGKPSEHHTYADIEA 125

Query: 61  ALDYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLP 120
           A   L +        ++++G+S+G      L    P ++  ++L    + IL    V+ P
Sbjct: 126 AYKCLEESYGTKQENVILYGQSVGSGPTLDLAARLP-RLRAVVLH---SPILSGLRVMYP 181

Query: 121 FLK--WFIGSNHSKGPKILNFLVRSPWSTVDVIGQVKQPVLFLSGLQDEMVPPSHMQMLY 178
             +  WF                   +  +D I  VK PVL + G  DE+V  SH + L+
Sbjct: 182 VKRTYWF-----------------DIYKNIDKIPLVKCPVLVIHGTSDEVVDCSHGKQLW 224


>28202.m000134 Protein bem46, putative
          Length = 373

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 28/218 (12%)

Query: 2   AGPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGIAKDAQAA 61
           A  T+L+   NA ++    ++   +   L  N+    Y GYG S G PS+     D +AA
Sbjct: 60  ASSTVLYSHGNAADLGQMYDLFFELSLHLKVNLMGYDYSGYGKSSGKPSEQNTYADIEAA 119

Query: 62  LDYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLPF 121
              L +R  +     +++G+S+G      L    P K+  ++L +   S L    V+ P 
Sbjct: 120 YRCLEERYGVKEEDTILYGQSVGSGPTLDLATRLP-KLRAVVLHSPIASGL---RVMYPV 175

Query: 122 LK--WFIGSNHSKGPKILNFLVRSPWSTVDVIGQVKQPVLFLSGLQDEMVPPSHMQMLYA 179
            +  WF                   +  VD I  V  PVL + G  D++V  +H + L+ 
Sbjct: 176 KRTYWF-----------------DIYKNVDKIPMVNCPVLVIHGTSDDVVDWTHGKQLW- 217

Query: 180 KAAAHNKECIFVEFPTGMHMDTWLAGGDQYWKTIQDFL 217
                  E ++V+   G H D  L    QY K ++ F+
Sbjct: 218 DLCKEKYEPLWVK--GGNHCDLELFP--QYIKHLKKFI 251


>29633.m000918 Protein bem46, putative
          Length = 381

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 40/227 (17%)

Query: 1   IAGPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGIAKDAQA 60
           +A  T+L+   NA ++    E+   +   L  N+    Y GYG S G PS+     D +A
Sbjct: 66  MATSTLLYSHGNAADLGQMYELFIELSIHLRVNLMGYDYSGYGQSSGKPSEQHTYADIEA 125

Query: 61  ALDYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLP 120
           A   L +        I+++G+S+G      L    P ++  ++L    + IL    V+ P
Sbjct: 126 AYKCLEESYGTKQEDIILYGQSVGSGPTLDLAARLP-QLRAVVL---HSPILSGLRVMYP 181

Query: 121 FLK--WFIGSNHSKGPKILNFLVRSPWSTVDVIGQVKQPVLFLSGLQDEMVPPSHMQMLY 178
             +  WF                   +  +D I  V  PVL + G  DE+V  SH + L+
Sbjct: 182 VKRTYWF-----------------DIYKNIDKIPLVNCPVLIIHGTSDEVVDCSHGKQLW 224

Query: 179 AKAAAHNKECIFVEFPTGMHMDTWLAGGD----QYWKTIQDFLKKYV 221
                        E     +   WL GG+    +++      LKK+V
Sbjct: 225 -------------ELCKEKYEPLWLKGGNHCDLEHFPEYIRHLKKFV 258


>59930.m000027 Protein bem46, putative
          Length = 385

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 23/179 (12%)

Query: 2   AGPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGIAKDAQAA 61
           A  T+L+   NA ++     +   +   L+ N+    Y GYG S G PS+     D +AA
Sbjct: 69  ASLTVLYSHGNAADLGQMYHIFTELSLHLNVNLMGYDYSGYGQSSGKPSEQDTYADIEAA 128

Query: 62  LDYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLPF 121
              L +   +    I+++G+S+G      L    P ++  +IL    + IL    V+ P 
Sbjct: 129 YKCLEETYGVKEEDIILYGQSVGSGPTLELATRLP-QLRAVIL---HSPILSGLRVMYPV 184

Query: 122 LK--WFIGSNHSKGPKILNFLVRSPWSTVDVIGQVKQPVLFLSGLQDEMVPPSHMQMLY 178
            K  WF                   +  +D I  V  PVL + G +D++V  SH + L+
Sbjct: 185 KKTFWF-----------------DIYKNIDKIPLVNCPVLVIHGTEDDVVDFSHGKQLW 226


>29737.m001230 Protein bem46, putative
          Length = 294

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 24/176 (13%)

Query: 5   TILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGIAKDAQAALDY 64
           T+L+   NA ++    E+   +   L  N+    Y GYG S G PS+     D +A  + 
Sbjct: 69  TLLYSHGNAADLGQMHELFIELRAHLRVNIMSYDYSGYGGSSGKPSEFNTYYDIEAVYNC 128

Query: 65  LTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLP--FL 122
           L +  +I    ++++G+S+G     L   +   K+ G++L    ++IL    VL P    
Sbjct: 129 L-KDYEIKQEDLILYGQSVGSG-PTLHLASRLKKLRGIVLH---SAILSGIRVLYPVKMT 183

Query: 123 KWFIGSNHSKGPKILNFLVRSPWSTVDVIGQVKQPVLFLSGLQDEMVPPSHMQMLY 178
            WF                   +  +D I  V  PVL + G  D++V  SH + L+
Sbjct: 184 FWF-----------------DIYKNIDKIRHVNCPVLVIHGTSDDIVDWSHGKRLW 222


>29726.m003920 catalytic, putative
          Length = 760

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 28/192 (14%)

Query: 4   PTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHG--IAKDAQAA 61
           P +++   N+G  A   E   I++   +  VF L + G G S G     G     D +A 
Sbjct: 66  PCVIYCHGNSGCRADASEAAIILLPS-NITVFTLDFSGSGLSGGEHVTLGWNEKDDLKAV 124

Query: 62  LDYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLPF 121
           +DYL  R D + S I ++GRS+G     +    +P  +AG++L++ F+ ++D+   L+  
Sbjct: 125 VDYL--RQDGNVSLIGLWGRSMGAVTSLMYGAEDP-SIAGVVLDSPFSDLVDLMMELVDT 181

Query: 122 LKWFIGSNHSKGPK-ILNFLVR--------------SPWSTVDVIGQVKQPVLFLSGLQD 166
            K+       + PK  + F ++              +  +T+ V      P LF   + D
Sbjct: 182 YKF-------RFPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKVAKSCFVPALFGHAIDD 234

Query: 167 EMVPPSHMQMLY 178
           + + P H   +Y
Sbjct: 235 DFIQPHHSDRIY 246