Jatropha Genome Database

JcCB0041771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041771.10 + phase: 0 
         (168 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29610.m000411 Coronatine-insensitive protein, putative                274   2e-74
29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        141   1e-34
30131.m006863 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        138   1e-33
29908.m006223 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        128   2e-30
29933.m001427 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        123   3e-29

>29610.m000411 Coronatine-insensitive protein, putative
          Length = 602

 Score =  274 bits (700), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/171 (80%), Positives = 150/171 (87%), Gaps = 7/171 (4%)

Query: 2   EEESQDSKLNRM----SCSSGMPDVVLECVMPYIDDPRDRDAVSLVCRRWYELDALTRKH 57
           EE +++SKLN+     SCS+G    VL+ VMPYI  P+DRDAVSLVCRRWYELDALTRKH
Sbjct: 3   EENNKNSKLNKTMSSGSCSNGSD--VLDYVMPYIQGPKDRDAVSLVCRRWYELDALTRKH 60

Query: 58  ITIALCYTTSPDRLRRRFKHLESLKLKGKPRAAMFNLIPEDWGGFVTPWVNEI-ADSFDC 116
           ITIALCYTTSPDRLRRRFKHLESLKLKGKPRAAMFNLIPEDWGG+VTPW++EI A SF C
Sbjct: 61  ITIALCYTTSPDRLRRRFKHLESLKLKGKPRAAMFNLIPEDWGGYVTPWIDEIAAASFTC 120

Query: 117 LKSVHFRRMIVKDSDLELLAKSRGRVLQVLKLDKCSGFSTDGLLHVGRLCR 167
           LKS+HF+RMIVKDSDL LLAKSRG+VL VLKLDKCSGFSTDGLLHV   CR
Sbjct: 121 LKSLHFKRMIVKDSDLALLAKSRGKVLHVLKLDKCSGFSTDGLLHVACFCR 171


>29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 585

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 98/152 (64%), Gaps = 1/152 (0%)

Query: 16  SSGMPDVVLECVMPYIDDPRDRDAVSLVCRRWYELDALTRKHITIALCYTTSPDRLRRRF 75
           +S  P+ VLE V+ +I   +DR+AVS+VC+ WYE++   R+ I +  CY  SP  + RRF
Sbjct: 6   ASSFPEEVLEHVLLFIQSDKDRNAVSMVCKSWYEIERWCRRRIFVGNCYAVSPTMVIRRF 65

Query: 76  KHLESLKLKGKPRAAMFNLIPEDWGGFVTPWVNEIADSFDCLKSVHFRRMIVKDSDLELL 135
             + S++LKGKP  A FNL+PE WGG+V PW+  ++ ++  L+ +  +RM+V D  LEL+
Sbjct: 66  PDVRSIELKGKPHFADFNLVPEGWGGYVFPWIVAMSSAYPWLEEIRLKRMVVSDEALELI 125

Query: 136 AKSRGRVLQVLKLDKCSGFSTDGLLHVGRLCR 167
           +KS  +  +VL L  C GFST GL  +   CR
Sbjct: 126 SKSF-KNFKVLVLSSCEGFSTGGLAAIAANCR 156


>30131.m006863 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 571

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 93/150 (62%), Gaps = 1/150 (0%)

Query: 19  MPDVVLECVMPYIDDPRDRDAVSLVCRRWYELDALTRKHITIALCYTTSPDRLRRRFKHL 78
            PD VLE V  ++   RDR++VS VC+ WY +++ +R+ + I  CY  SP+R+  RF  L
Sbjct: 4   FPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESCSRRKVFIGNCYAISPERVIERFPDL 63

Query: 79  ESLKLKGKPRAAMFNLIPEDWGGFVTPWVNEIADSFDCLKSVHFRRMIVKDSDLELLAKS 138
           +S+ LKGKP  A FNL+P DWGG+V PW+   A     L+ +  +RM+V D  LELL++S
Sbjct: 64  KSITLKGKPHFADFNLVPHDWGGYVYPWIEAFARHRVGLEELRLKRMVVSDESLELLSRS 123

Query: 139 RGRVLQVLKLDKCSGFSTDGLLHVGRLCRY 168
                + L L  C GF+TDGL  V   CRY
Sbjct: 124 FLN-FKSLVLVSCEGFTTDGLASVAANCRY 152


>29908.m006223 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 635

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 86/145 (59%), Gaps = 1/145 (0%)

Query: 23  VLECVMPYIDDPRDRDAVSLVCRRWYELDALTRKHITIALCYTTSPDRLRRRFKHLESLK 82
           VLE V+ ++   RDR+A SLVC+ WY ++ALTR  + I  CY  S  R   RF  ++S+ 
Sbjct: 72  VLENVLCFLTSRRDRNAASLVCKSWYRVEALTRSELFIGNCYAVSTRRATCRFTRIKSVT 131

Query: 83  LKGKPRAAMFNLIPEDWGGFVTPWVNEIADSFDCLKSVHFRRMIVKDSDLELLAKSRGRV 142
           LKGKPR A FNL+P +WG    PWV  +  ++  L+ VH +RM V D DL LLA+S    
Sbjct: 132 LKGKPRFADFNLMPPNWGAHFAPWVTTMGKAYPWLEKVHLKRMTVTDDDLALLAESFSG- 190

Query: 143 LQVLKLDKCSGFSTDGLLHVGRLCR 167
            + L L  C GF T GL  V   CR
Sbjct: 191 FKELVLVCCDGFGTSGLAIVASRCR 215


>29933.m001427 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 589

 Score =  123 bits (309), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 1/152 (0%)

Query: 16  SSGMPDVVLECVMPYIDDPRDRDAVSLVCRRWYELDALTRKHITIALCYTTSPDRLRRRF 75
           +S  PD VLE V+  +   +DR +VSLVC+ WY  +  +R H+ I  CY+ SP+ + RRF
Sbjct: 21  TSQFPDEVLERVLGLLKSNKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEIVARRF 80

Query: 76  KHLESLKLKGKPRAAMFNLIPEDWGGFVTPWVNEIADSFDCLKSVHFRRMIVKDSDLELL 135
             + S+ LKGKPR + FNL+P +WG  +  W+   A  +  L+ +  +RM V D  LE L
Sbjct: 81  PKIRSVTLKGKPRFSDFNLVPRNWGADIQSWLVVFASKYPFLEELRLKRMTVNDESLEFL 140

Query: 136 AKSRGRVLQVLKLDKCSGFSTDGLLHVGRLCR 167
           + +     + L L  C GFSTDGL  +   C+
Sbjct: 141 SLNFPN-FKALSLLSCDGFSTDGLAAIATHCK 171