Jatropha Genome Database

JcCB0039521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0039521.10 + phase: 0 
         (307 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29601.m000449 bacteriochlorophyll synthase, putative                  477   e-135
29698.m000067 bacteriochlorophyll synthase, putative                   54   8e-08
27553.m000325 bacteriochlorophyll synthase, putative                   54   1e-07

>29601.m000449 bacteriochlorophyll synthase, putative
          Length = 344

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 237/293 (80%), Positives = 243/293 (82%)

Query: 15  NTWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNLEDVAKSIVCMLMSGPFLTGYTQTL 74
           N WKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNLEDVAKS+VCMLMSGPFLTGYTQT+
Sbjct: 52  NKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNLEDVAKSVVCMLMSGPFLTGYTQTI 111

Query: 75  NDYYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHNSPTVFYL 134
           NDYYDREIDAINEPYRPIPSGAISE+EVITQIWV            DVWAGH+ P VFYL
Sbjct: 112 NDYYDREIDAINEPYRPIPSGAISESEVITQIWVLLLGGLGLGGLLDVWAGHDFPIVFYL 171

Query: 135 ALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYS 194
           ALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYS
Sbjct: 172 ALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYS 231

Query: 195 IAGLGIAIVNDFKSIEGDRALGLQSLPVAFGAETAKWICVGAIDITQISIXXXXXXXXXX 254
           IAGLGIAIVNDFKSIEGDRA+GLQSLPVAFGAETAKWICVGAIDITQIS+          
Sbjct: 232 IAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGAETAKWICVGAIDITQISVAGYLLGAGKP 291

Query: 255 XXXXXXXXXXXPQVFFQFQYFLKDPAKYDVKYQASAQPFXXXXXXXXXXXXSH 307
                      PQV FQFQYFLKDP KYDVKYQASAQPF            SH
Sbjct: 292 YYALALLALIIPQVVFQFQYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 344


>29698.m000067 bacteriochlorophyll synthase, putative
          Length = 432

 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 24/202 (11%)

Query: 50  LEDVAKSIVCMLMSGPFLTGYTQTLNDYYDREIDAINEPYRPIPSGAISENEVITQIWVX 109
           L  V +++   LM   ++ G    LN   D EID +N+PY P+ SG  S    +  +   
Sbjct: 155 LTGVLEAVAAALMMNIYIVG----LNQLTDIEIDKVNKPYLPLASGEYSVGMGVMIV--- 207

Query: 110 XXXXXXXXXXXDVWAG--HNSPTVFYLALGGSLLSYIYSA--PPLKLKQNGWIGN---FA 162
                        W G    S  +F+      +L   YS   P  + K+  ++      A
Sbjct: 208 -----TSFSIMSFWLGWIVGSWPLFWALFISFILGTAYSVNLPLFRWKRFAFVAAMCILA 262

Query: 163 LGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLG-----IAIVNDFKSIEGDRALGL 217
           + A  + L ++    +     P +    L+++ A +      IA+  D   IEGD+  G+
Sbjct: 263 VRAVIVQLAFYLHMQIHVYRRPAVFSRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGI 322

Query: 218 QSLPVAFGAETAKWICVGAIDI 239
           +S  V  G E   WIC+  ++I
Sbjct: 323 RSFTVRLGQERVFWICISLLEI 344


>27553.m000325 bacteriochlorophyll synthase, putative
          Length = 373

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 44/216 (20%)

Query: 48  WNLEDVAKSIVCMLMSGPFLTGYTQTLNDYYDREIDAINEPYRPIPSGAISENEVITQIW 107
           W+L   A S +  L+ G    GY   +N  YD  ID +N+PY PI +G +S    +   W
Sbjct: 139 WSLLLKAVSGLFALICG---NGYIVGINQIYDIGIDKVNKPYLPIAAGDLS----VQSAW 191

Query: 108 VXXXXXXXXXXXXDVWAGHN-SPTVFYLALGGSLLSYIYSAPPLKLKQ------------ 154
           +             +  G N  P +  L   G  L  IYS PP ++K+            
Sbjct: 192 LLVIFFSVTGI---LMVGLNFGPFITSLYCLGLFLGTIYSIPPFRMKRFAVAAFLIIAMV 248

Query: 155 NGWIGNF--------ALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDF 206
            G++ NF        ALG S+     W+    F         +T   ++  L IAI  D 
Sbjct: 249 RGFLLNFGVYHATRAALGLSF----EWSSPVAF---------ITTFVTLFALVIAITKDL 295

Query: 207 KSIEGDRALGLQSLPVAFGAETAKWICVGAIDITQI 242
             +EGDR   + +L  + G     ++  G + +  I
Sbjct: 296 PDVEGDRKYKISTLATSLGVRNIAFLGTGLLLLNYI 331