Jatropha Genome Database

JcCB0037771.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0037771.30 + phase: 1 /TE/partial
         (610 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30180.m001016 conserved hypothetical protein                           71   2e-12
27732.m000287 conserved hypothetical protein                           64   2e-10
30078.m002267 conserved hypothetical protein                           54   2e-07
30106.m000650 conserved hypothetical protein                           49   6e-06

>30180.m001016 conserved hypothetical protein
          Length = 127

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 69/121 (57%)

Query: 79  GAIGGDSSLATKRHAXEIYSVHTKRVAEPLHKTITISEXDNKHVHFPYFDALVVEGMMEN 138
           G+  GDS+   K+    +YS+   R        I  S+ +++ +   + DALVV+  + N
Sbjct: 6   GSTVGDSATKRKQAVRSVYSIAISREPRKNFGLIKFSDANSQGILNSHNDALVVKAYINN 65

Query: 139 YNVRRMLIDDGSSVNLITLEVFKALKLDITKIKSMXTPLEGLAGRQVSMEGSLEIALELK 198
           + VR +LIDD SS+N+IT+ VF ++ L    +  + TP  GL G+ + +EGS+ + +EL 
Sbjct: 66  FLVRWILIDDKSSINMITMPVFLSMGLKHNHLTLVSTPFIGLGGKTILVEGSIHLDVELG 125

Query: 199 D 199
           D
Sbjct: 126 D 126


>27732.m000287 conserved hypothetical protein
          Length = 284

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 2/113 (1%)

Query: 147 DDGSSVNLITLEVFKALKLDITKIKSMXTPLEGLAGRQVSMEGSLEIALELKDREHTRTE 206
           D GS+VNLI L+  K +   I K+K    PL G  G  +   G  ++ ++  D   T   
Sbjct: 172 DSGSAVNLIKLDAHKYMGGTIAKLKEAVIPLAGFGGTTIQPVGVTKLMVKFDDEGRTSYT 231

Query: 207 MPKFVVMDIPFPDYAILGRPLFYTLGTYTSIRYLVMKFYSNSGDIIIVRGNQK 259
              F V  +    Y ILG P  Y L   TSIR L MK     G I++VRG+QK
Sbjct: 232 KMLFNVAHVKLA-YIILGTPFLYELKAVTSIRRLSMKILIRGG-IVMVRGDQK 282


>30078.m002267 conserved hypothetical protein
          Length = 104

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 210 FVVMDIPFPDYAILGRPLFYTLGTYTSIRYLVMKFYSNSGDIIIVRGNQKVAKEAYVVAL 269
           F+V+DIPF    I+GRP+ Y       IRYL MK  ++ G II + G+Q  AKE Y    
Sbjct: 43  FMVIDIPFEYNVIIGRPILYDTEATICIRYLTMKISTSKG-IITIWGDQGAAKECYTAGT 101

Query: 270 K 270
           K
Sbjct: 102 K 102


>30106.m000650 conserved hypothetical protein
          Length = 105

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 44/74 (59%)

Query: 126 YFDALVVEGMMENYNVRRMLIDDGSSVNLITLEVFKALKLDITKIKSMXTPLEGLAGRQV 185
           Y D L+++  +E   V ++L+D  S +N +TL VF+ +   IT +      L GL G+Q+
Sbjct: 29  YNDPLIIQAYLERTTVWKLLVDGKSIINFLTLSVFRKMGGSITDLIPTTVSLVGLGGKQM 88

Query: 186 SMEGSLEIALELKD 199
              G++++ ++++D
Sbjct: 89  QPMGTVDLLIKIED 102