Jatropha Genome Database

JcCB0037201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0037201.10 - phase: 2 /pseudo/partial
         (187 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29092.m000450 C-14 sterol reductase, putative                         155   8e-39

>29092.m000450 C-14 sterol reductase, putative
          Length = 282

 Score =  155 bits (393), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/92 (88%), Positives = 81/92 (88%), Gaps = 8/92 (8%)

Query: 12  RGLELLSATFIFSVLLYILDYFFYEEYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQAC 71
           RGLELLSATFIFSVLLYILDYFFYEEYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQ  
Sbjct: 84  RGLELLSATFIFSVLLYILDYFFYEEYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQ-- 141

Query: 72  SYEPDLGWWLLGNKVELTMAAVIANCFVFLIG 103
                 GWWLLGNKVELT  AVIANC VFLIG
Sbjct: 142 ------GWWLLGNKVELTTVAVIANCIVFLIG 167