Jatropha Genome Database
- JcCB0036911.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0036911.10 + phase: 0 /TE/partial
(268 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29607.m000244 hypothetical protein 99 2e-21
29813.m001504 nucleic acid binding protein, putative 88 4e-18
28657.m000384 conserved hypothetical protein 77 7e-15
29608.m000209 conserved hypothetical protein 75 3e-14
30128.m009031 conserved hypothetical protein 70 1e-12
30068.m002537 conserved hypothetical protein 66 2e-11
29642.m000286 conserved hypothetical protein 65 3e-11
29769.m000452 conserved hypothetical protein 65 5e-11
29790.m000818 conserved hypothetical protein 60 1e-09
29910.m000930 RNA binding protein, putative 57 1e-08
29738.m001015 hypothetical protein 55 3e-08
30225.m001681 conserved hypothetical protein 54 1e-07
29673.m000908 hypothetical protein 51 5e-07
30076.m004449 conserved hypothetical protein 50 8e-07
30170.m013938 conserved hypothetical protein 50 8e-07
28637.m000209 RNA binding protein, putative 50 9e-07
29661.m000941 hypothetical protein 48 5e-06
>29607.m000244 hypothetical protein
Length = 329
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 65 RNRRVWQQINVDPYNIVMAATSFLREWKNA-QLNRS-NSSVPLASXXXXXXXXXXXXKCN 122
RN +W+ P V A SFL +W +A L R+ N + + KCN
Sbjct: 120 RNLCLWEGQLQQPAQTVFCALSFLCDWASACSLQRNGNEARVMLEVLTCCPPQPGFVKCN 179
Query: 123 FDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNIE 182
D A+ GRS + +IRD AG F++ G G+ +AEAIGLRE + W+L
Sbjct: 180 VDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGRS 239
Query: 183 RVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHALAR 242
V+ E D + AV +G ++ V+ + + L+ + + + R+Q N AH+LAR
Sbjct: 240 NVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLAR 299
Query: 243 VACLHPCFRLWDSIPQCIATLI 264
+ L F ++ P CI L+
Sbjct: 300 ASHLQDGFNMFSVPPDCIRNLV 321
>29813.m001504 nucleic acid binding protein, putative
Length = 483
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 16/251 (6%)
Query: 5 ETTMHMLFLCEKARLCWTLTGIPLDRSTTDFRDMLLG---LIDRRSTEQCSFFSVLCYFI 61
ET MH+L LC+ W + L + + ++L G + + + F VL + +
Sbjct: 233 ETIMHILVLCDVTTQSWKY--VNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWWSL 290
Query: 62 WFDRNRRVWQQINVDPYNIVMAATSFLREWKNA-------QLNRSNSSVPLASXXXXXXX 114
W + N VW + + A+SFL +W A QL R +
Sbjct: 291 WTNMNDVVWNGKKLSWRAVASRASSFLFQWGKARKLTDYHQLGRHFA----GGDCLWQKP 346
Query: 115 XXXXXKCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLY 174
K N DA+ A G+S + ++RD AG ++ + P +AEA L+E L
Sbjct: 347 ATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEAWALKEALS 406
Query: 175 WLLMRNIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVN 234
W+ + +E V +ETDCLR + + P S +L++ + L+ L+ C LV+ N
Sbjct: 407 WIHAKGMEEVQIETDCLRNIELLEEELHPNSYLLCLLKDCQDLLRVLNRCNLVFVYGSAN 466
Query: 235 KPAHALARVAC 245
AH +++ C
Sbjct: 467 TVAHMISKATC 477
>28657.m000384 conserved hypothetical protein
Length = 163
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 120 KCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMR 179
K N DA I + +++D AG F+ A FAG P IAE + ++E L W R
Sbjct: 37 KVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQEALSWARDR 96
Query: 180 NIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHA 239
+ V+ E DCL + +A+ S ++++ K L S +S+C + +R N+ AH
Sbjct: 97 QLLNVVFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSSSISNCSFAFVKRSRNEVAHK 156
Query: 240 LARVA 244
LARV+
Sbjct: 157 LARVS 161
>29608.m000209 conserved hypothetical protein
Length = 273
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%)
Query: 120 KCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMR 179
KCN D + R + + ++++G F A G +G L P +AEA+ LRE L W+
Sbjct: 138 KCNIDVVVFVANNRLGFGFIFQNDSGTFRAATNGLISGPLDPQVAEALSLREDLCWVKGL 197
Query: 180 NIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHA 239
++ V+ E+DCL L AV S + ++ + + + +++ +V+ +R N+ AH
Sbjct: 198 DLNYVVSESDCLTLVNAVNKVGVNSSLFGLLIGDCRSFLKEMNHAHIVFVKRFGNRVAHL 257
Query: 240 LARVA 244
LARV
Sbjct: 258 LARVT 262
>30128.m009031 conserved hypothetical protein
Length = 223
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 61 IWFDRNRRVWQQINVDPYNIVMAATSFLREWKNAQLNRSNSSVPLASXXXXXXXXXXXXK 120
+W RN +W + A SFL +W+ +R+ S+V L S
Sbjct: 32 VWKQRNNLLWTGACTPVLVSLSNALSFLHQWRR---SRATSTV-LGSTRTQ--------- 78
Query: 121 CNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGH-FAGVLQPHIAEAIGLREVLYWLLMR 179
E + A ++ D G F +AC H G+ +P +AEA+ L+E + W +
Sbjct: 79 -------GTNEMKIGMAAVVSDSNGTF-VACMAHAVLGLFEPRLAEAVALKEAIRWAIQM 130
Query: 180 NIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHA 239
V+ E+D A+ + +S++ +++E + L+S + ++ + +RQ N AH
Sbjct: 131 RFSLVVFESDSKIAVDAIRSLAADWSEFGIIIDECRSLLSLGLNFQVYFVKRQANMVAHV 190
Query: 240 LARVACLHPCFRLWDSIPQCIATLISHD 267
LA + + W+ IP C+ ++ +
Sbjct: 191 LAMSSYSYASLATWNVIPSCVEAILFQE 218
>30068.m002537 conserved hypothetical protein
Length = 668
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 5/192 (2%)
Query: 3 EIETTMHMLFLCEKARLCWTLTGIPLDRST-TDFRDMLLGLIDRRSTEQCSFFSVLCYFI 61
E ET H+LF C AR CW L G T + + + C+ +++C +
Sbjct: 475 EPETLFHVLFGCSMARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSL 534
Query: 62 WFDRNRRVWQQINVDPYNIVMAATSFLREWKNAQLNRSNSSVPLASXXXXXXXXXXXX-- 119
W RN VW + + Y ++ A L + AQ + PL
Sbjct: 535 WNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRKWTKPELG 594
Query: 120 --KCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLL 177
K N D A+ +GR ++RD G+ ++A + G AEA+ ++E L ++
Sbjct: 595 WLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSMKEALSYMK 654
Query: 178 MRNIERVLVETD 189
+++ E D
Sbjct: 655 DYQMDKCFFELD 666
>29642.m000286 conserved hypothetical protein
Length = 346
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 70/136 (51%)
Query: 132 GRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNIERVLVETDCL 191
G + ++RD F+ + + G++Q +E + LRE L W+ + +RV+ E DC
Sbjct: 207 GETRIGMVLRDATRVFMCCASNCYEGLVQVRESETMRLREALSWIRGKWYQRVIFELDCQ 266
Query: 192 RLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHALARVACLHPCFR 251
++ AVT ++ ++ E +L+++ +S +++ +RQ N+ A+ LAR H R
Sbjct: 267 QIVHAVTNFLASVDEFGSLIRECAELLAENNSYSVIFVKRQANEIAYMLARAPHSHAGLR 326
Query: 252 LWDSIPQCIATLISHD 267
+ P I TL+ D
Sbjct: 327 VCFEPPTFILTLLFSD 342
>29769.m000452 conserved hypothetical protein
Length = 180
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 120 KCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMR 179
KCN DA+I+ T+G ++ + RD G+FL A G ++ P +AEA+ RE L WL
Sbjct: 102 KCNMDASIYLTKGNIAFGMVTRDADGRFLEARNGLINAIMDPLLAEALSCREALSWLKTA 161
Query: 180 NIERVLVETDC 190
E+VLVE DC
Sbjct: 162 GKEKVLVEYDC 172
>29790.m000818 conserved hypothetical protein
Length = 191
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 120 KCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMR 179
K N DA I + R+ Y ++R+ A + A GV + ++AEA+ +RE L W+
Sbjct: 62 KINEDAGIFQAQNRTGYGMVVRNHAANLVAARALIIHGVYEANLAEAMAVREALSWIKHM 121
Query: 180 NIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHA 239
N RV ++ D L + A+T+ + +++ K +++ + RR N AH
Sbjct: 122 NWSRVSIDMDSLGVCVALTSDNLSF---GLIIDGCKHVVANIHDAAFTCIRRSTNHCAHM 178
Query: 240 LARVA 244
LAR +
Sbjct: 179 LARAS 183
>29910.m000930 RNA binding protein, putative
Length = 446
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 6/216 (2%)
Query: 2 GEIETTMHMLFLCEKARLCWTLTGIPLDRSTTDFRDMLLGLIDRRSTEQCSF---FSVLC 58
G +ET ++ C+ R W + L T D+ + S F F++L
Sbjct: 173 GCVETQTYVFKKCQFVRSFWLTYPLGLRVDTIVVEDLKNWVNQIHSVGDDDFIEKFAMLL 232
Query: 59 YFIWFDRNRRVWQQINVDPYNIVMAATSFLREWKNAQLNRSNSSVPLASXXXXXXXXXXX 118
+ W RN+ ++++ D V A FL ++ + + S P
Sbjct: 233 WCYWNLRNKFIFERKEEDVVTTVQRALVFLHGFQTSNVA---CSAPTVLTSKGSCPSSDF 289
Query: 119 XKCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLM 178
K N DAA+ S ++RD+AG L + + Q +AEA+ + E L +
Sbjct: 290 IKTNIDAAVDENRSLSDVGAVVRDQAGSVLFSLQKRVSLKCQSDVAEAVAILEALITVQD 349
Query: 179 RNIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEI 214
N ++V++E+D L + + + +LE+I
Sbjct: 350 SNFQQVIIESDSLTAINGLQSKVFGLLSFHQLLEDI 385
>29738.m001015 hypothetical protein
Length = 304
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 65/130 (50%)
Query: 139 LIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNIERVLVETDCLRLFQAVT 198
+IRD A +F+ T F+G+ + E I LRE L W ++ ++ V+ + D + +
Sbjct: 171 VIRDSASRFIKGSTRWFSGIWEVKEVECIVLREPLNWDVLLELQNVIFDVDAEAVVDVIQ 230
Query: 199 TGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHALARVACLHPCFRLWDSIPQ 258
+ S++ +++ ++ S ++ + ++Q N AH LAR + L W+ P
Sbjct: 231 SRSSDVSEFGVFIKDCLSFLADNLSFQVWFVKQQANVVAHKLARASHLFGSGVDWEEPPS 290
Query: 259 CIATLISHDL 268
++ L+S D+
Sbjct: 291 FVSELLSFDV 300
>30225.m001681 conserved hypothetical protein
Length = 185
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 66 NRRVWQQINVDPYNIVMAATSFLREWKN--AQLNRSNSSVPLASXXXXXXXXXXXXKCNF 123
N VW+ + +++ ATS L +WK + L R+ +S + S KCN
Sbjct: 68 NELVWKGVRKSDQVVLLYATSLLSQWKTNLSDLERNGNSSSMVSNAKWSKPPSRYLKCNM 127
Query: 124 DAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWL 176
DA + + + L++DE + A G + P +AEA+ R+ L WL
Sbjct: 128 DATSFPNQDKVGFGCLLKDEFRAVVAARNGFLHCAIDPTLAEALTCRDALCWL 180
>29673.m000908 hypothetical protein
Length = 270
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 12/180 (6%)
Query: 5 ETTMHMLFLCEKARLCWTLTGI----PLDRSTTDFRDMLLGLIDRRSTEQCSFFSVLCYF 60
E+ H L C + W ++ + + S D+ + D+ ST C + + +
Sbjct: 91 ESIYHALIDCSFVKEVWVISVLVSRGNRNGSICDWLQEIFTKFDK-STWHC--IAAIVWN 147
Query: 61 IWFDRNRRVWQQINVDPYNIVMAATSFLREWKNAQLNR----SNSSVPLASXXXXXXXXX 116
+W RN VW P IV A ++L+ W AQ N+ V +
Sbjct: 148 LWIHRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSPDNNEVFNHNLAKWKKPKS 207
Query: 117 XXXKCNFDAAIHATEGRSSYAGLIRDEAGQFLIA-CTGHFAGVLQPHIAEAIGLREVLYW 175
KCN DA+ +G ++R+ G L A T L +AEA+ RE L W
Sbjct: 208 GSLKCNVDASTFNQQGMIGAGYVLRNTEGALLGARITSFVQSDLNLKLAEALSFREALSW 267
>30076.m004449 conserved hypothetical protein
Length = 189
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 120 KCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMR 179
+ NFDAA R S + R+ Q L + + G+L P + E++ LR+ + W L
Sbjct: 60 RINFDAASRPGLARGSVGFVARNGCDQILSSMAKAYVGILDPLVLESLALRDSMEWALES 119
Query: 180 NIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHA 239
+V E D L + Q V + +++EI + S+ + + R N H
Sbjct: 120 AWNKVFFEGDSLAIVQMVNKNSSFRASVMMIIQEIFSSLPSFSNVRVSYCPRACNILTHN 179
Query: 240 LARVACLHP 248
A+ P
Sbjct: 180 EAKSVFSSP 188
>30170.m013938 conserved hypothetical protein
Length = 92
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 122 NFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNI 181
N DAA+ A + ++R G FL A F G + IAEA+ LRE L WL+ +
Sbjct: 2 NVDAAMFANSNKVGVGRVLRVHEGNFLSAFVNSFPGNVVVLIAEALALREALQWLVEQRY 61
Query: 182 ERVLVETDCLRLFQA 196
V++E+D L + QA
Sbjct: 62 NHVILESDSLLVVQA 76
>28637.m000209 RNA binding protein, putative
Length = 197
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 67/174 (38%), Gaps = 8/174 (4%)
Query: 5 ETTMHMLFLCEKARLCWTLTGIPLDRSTTDFR--DMLLGLIDRRSTEQCSFFSVLCYFIW 62
E+ + L C + W ++ + + R + D L + + +VL + +W
Sbjct: 23 ESIYYALIDCSFVKEVWVIS-VLISRGNRNGSICDWLQEMFTKFEKSTWGCIAVLVWNLW 81
Query: 63 FDRNRRVWQQINVDPYNIVMAATSFLREWKNAQLNR----SNSSVPLASXXXXXXXXXXX 118
RN VW P IV A ++L +W AQ NS + +
Sbjct: 82 IHRNEVVWYSKRKQPTQIVDGAVTYLHKWLIAQQTNPPSPDNSGLFHHNLAKWKKPKTGW 141
Query: 119 XKCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFA-GVLQPHIAEAIGLRE 171
KCN DAAI +G ++R+ G F+ A F L P +AE RE
Sbjct: 142 PKCNIDAAIFNQQGMIGADCVLRNTEGAFIGARINSFVQSDLNPKLAEDPSFRE 195
>29661.m000941 hypothetical protein
Length = 199
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 3/183 (1%)
Query: 62 WFDRNRRVWQQINVDPYNIVMAATSFLREWKNAQLNRSNSSVPLASXXXXXXXXXXXXKC 121
WF RN + ++ + + V A +FL E+ NR + K
Sbjct: 12 WFRRNSFIHSRLLIPDEDFVGWAVNFLEEYNTE--NRKPARFK-RDYHCWKPPDYGLLKL 68
Query: 122 NFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNI 181
+ DAA+H + S ++RD G + + L + EA+ ++ L +
Sbjct: 69 DTDAAVHFDKNISGLGMVLRDHKGCVKLVGSYPMKQGLPVEVVEAMAIKCGLSVASSHGL 128
Query: 182 ERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHALA 241
+VE+D L++ A+ +S+ A VL EI ++S SC+ + R+ N+ A+AL+
Sbjct: 129 WPSVVESDSLQVVNAICNREVIFSELAAVLSEIFAMLSLNFSCDFKFIFRECNQMANALS 188
Query: 242 RVA 244
+ A
Sbjct: 189 KSA 191