Jatropha Genome Database

JcCB0035141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0035141.10 - phase: 0 /partial
         (561 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014154 hypothetical protein                                    732   0.0  

>30170.m014154 hypothetical protein
          Length = 849

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/582 (66%), Positives = 450/582 (77%), Gaps = 31/582 (5%)

Query: 1   MESTPKSRPIHIKCDSSKPSSAWNWLERWISVSSAAPTPQPNLKTEEVERENKDENLFTV 60
           MESTPK+RPIHIKCD SKP+SAW+WLERW+SVSSA PTPQP    E++E E K  +L ++
Sbjct: 224 MESTPKARPIHIKCDPSKPNSAWSWLERWMSVSSAEPTPQPGSTNEQLESERK-AHLASL 282

Query: 61  AETAVPSEGFSELADSKSN-KETVLPSETDENQITYDADDSKFQQHHPTSSLLGDNSVQP 119
            ET VP EG  EL DSKSN +E VLPSE  +N +T DADD +FQ+ HPTSSL+G  S  P
Sbjct: 283 LETVVPCEGSLELGDSKSNLEEIVLPSEAKQNPMTNDADDFEFQESHPTSSLVGGASELP 342

Query: 120 QFNTISTSTSDAKESSIDIKSLPNQNMQSN--------------------------ENYQ 153
           QF  IS S  DAKE+ +DI SLP+Q+MQS+                           N Q
Sbjct: 343 QFEKISKS--DAKEALVDINSLPSQSMQSDINSHMHVKLEPSSDINTLPSQTMQSDVNSQ 400

Query: 154 MEINSHFHKAEIEGEETDQPKRSMKRNASEQLETEGKRFVFGSRKIGNPAFIAVQSKFEE 213
           M++N+  HKAE E E+TDQPKRSMKR ASEQLETEGK+FV+GSRK  NPAF+A  SKFEE
Sbjct: 401 MQLNALSHKAETEVEQTDQPKRSMKRYASEQLETEGKKFVYGSRKASNPAFVAAHSKFEE 460

Query: 214 LSSTANSNKSFSLSYQDGAVESNMDTISSGADTVVRTKELNLVGNSVPNNLRGQCGDSEC 273
           LS T NSNKS S SYQD  VE NMDT+SSG +T + T E+N+V +SVPNNLR Q G SEC
Sbjct: 461 LSVTMNSNKSLSSSYQDSGVELNMDTVSSGENTAMSTIEVNMVEDSVPNNLRVQYGGSEC 520

Query: 274 GTELSVTSTLDSPDIFEVGATEYEHEAKSSEKETYNRNSTIDVVVEAKDVPTDPVSNPFD 333
           GTELSVTSTLDSPD  EVGA   EHEA+S+EKET N +   D V E+K  PTD +S+  D
Sbjct: 521 GTELSVTSTLDSPDRSEVGAAYNEHEARSTEKETCNLDIKKDNV-ESKIEPTDSLSDLSD 579

Query: 334 YLMVQPEKLDTVKDESVDSVVAADSLHVELKPERSASDVQRELYSETGGPAYRSSPEASP 393
            ++++PEKLD V+  SV+S+VAADS +++LKPERSA DVQ EL+SETGGPAYR+SPEASP
Sbjct: 580 SVVIKPEKLDNVRSVSVNSIVAADSPNIDLKPERSAPDVQVELHSETGGPAYRTSPEASP 639

Query: 394 RSHMTVPESQGTPSSQVSVKPKRNRSDKSASSQKRKSLSAGKRSPSNPNHDSGARSSMEQ 453
           RSH+T+PESQGTPSSQ+SVK K+ ++DKSASSQKRKSLSAGKRSPSN N DSGARSSMEQ
Sbjct: 640 RSHITIPESQGTPSSQLSVKAKKTKTDKSASSQKRKSLSAGKRSPSNSNIDSGARSSMEQ 699

Query: 454 LPKDQKNGKRRNSFGSSRPDNTDQEARDXXXXXXLPHFMQATESARAKIQANNSPRSSPD 513
           LPKDQKNGKRRNSFGS RP+ TD+  RD      +PHFMQATESARAKIQAN+SPRSSPD
Sbjct: 700 LPKDQKNGKRRNSFGSIRPEQTDEGPRDSSSSNSVPHFMQATESARAKIQANSSPRSSPD 759

Query: 514 VHDREYIKKRQSLPGSNGRQSSPSIQRSLSQAQPGTKGNGSH 555
           V DR+YIKKR SLPG+NGRQ SP IQRS+SQAQ GTKGNGS 
Sbjct: 760 VQDRDYIKKRHSLPGANGRQGSPRIQRSMSQAQQGTKGNGSQ 801