Jatropha Genome Database

JcCB0035061.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0035061.20 + phase: 0 
         (285 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30148.m001415 tRNA (guanine-n(7)-)-methyltransferase, putative        254   2e-68
30078.m002304 phosphoglycerate kinase, putative                       134   3e-32

>30148.m001415 tRNA (guanine-n(7)-)-methyltransferase, putative
          Length = 219

 Score =  254 bits (650), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 121/154 (78%), Positives = 139/154 (90%), Gaps = 2/154 (1%)

Query: 26  ENRINACIGAKELRSTDLVAMEYADLNLSHIISGELGHVRVRQHVNPLSSSFSVPARIPD 85
            N +NACIG+KELRSTDLVA+EYA+LNL+   SGELGHVR+RQHVNPLSSSFSVPA +P+
Sbjct: 53  SNTVNACIGSKELRSTDLVALEYAELNLTDKTSGELGHVRIRQHVNPLSSSFSVPALVPN 112

Query: 86  WKEVFRDPTLPLMVDIGSGSGRFLIWLAKRNRNIGNYLGIEIRQKMQLVNRAEHWIKELA 145
           WKEVF+DPTLPLMVDIGSGSGRFLIWLA++N + GNYLGIEIRQK  LV RAE W+K++A
Sbjct: 113 WKEVFKDPTLPLMVDIGSGSGRFLIWLARKNPDSGNYLGIEIRQK--LVRRAELWVKQMA 170

Query: 146 LDNLHFLFANATVSFRQLVVGYPGPLMFVSILCP 179
           L N++FLFANATVSFRQLV+ YPGPLMFVSIL P
Sbjct: 171 LGNIYFLFANATVSFRQLVLEYPGPLMFVSILTP 204


>30078.m002304 phosphoglycerate kinase, putative
          Length = 678

 Score =  134 bits (338), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 122/208 (58%), Gaps = 10/208 (4%)

Query: 80  PARIPDWKEVFRDPTLPLMVDIGSGSGRFLIWLAKRNRNIGNYLGIEIRQKMQLVNRAEH 139
           P +I DW  V+ DP  PL+VDIG G+G FL+ +A+R +++ N+LG+EI +K  LV R   
Sbjct: 477 PFKI-DWSAVYHDPAQPLVVDIGCGNGMFLLGMARRKKDL-NFLGLEINKK--LVRRCLD 532

Query: 140 WIKELALDNLHFLFANATVSFRQLVVGYPGPLMFVSILCPDPXXXXXXXXXXVVQKPLVD 199
            + +  + N HF+  NAT +FR +V  YPG L+ VSI CP+P          ++Q+ LV+
Sbjct: 533 SVHQSGISNGHFIATNATTTFRSIVSSYPGELVLVSIQCPNPDFNDPEHRWRMLQRSLVE 592

Query: 200 SIINNLAPGGKVFVQSDVLEVALDMRNQF--DAESDMLRHIDETDLSMLCDKDGWLLNNP 257
           ++ + LA  GKVF+QSD+  VA+ M+  F       ++   D+ + ++      WL  NP
Sbjct: 593 AVADLLAHDGKVFLQSDIKTVAVRMKELFLKYGRGRLMLVNDQFEATIRV----WLEENP 648

Query: 258 MGIRTEREIHAEFEGAKIYRRLYQKRTS 285
            G+R++ E H   +G  +YR +  K T+
Sbjct: 649 FGVRSDWEQHVIDQGRPMYRLMLSKSTN 676