Jatropha Genome Database

JcCB0034881.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0034881.20 + phase: 0 /pseudo
         (158 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010847 dynamin, putative                                       248   1e-66
29742.m001419 dynamin, putative                                       226   3e-60
29709.m001211 dynamin, putative                                       201   1e-52
29628.m000770 dynamin, putative                                       193   3e-50
27647.m000182 dynamin, putative                                       192   7e-50
29506.m000169 dynamin, putative                                       108   1e-24
29848.m004504 dynamin, putative                                       105   8e-24

>30190.m010847 dynamin, putative
          Length = 610

 Score =  248 bits (632), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 120/134 (89%), Positives = 121/134 (90%)

Query: 1   MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFL 60
           MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIA            LES+VGKDFL
Sbjct: 1   MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFL 60

Query: 61  PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTKQ 120
           PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGR KQ
Sbjct: 61  PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRAKQ 120

Query: 121 ISSVPIHLSIYSPN 134
           ISSVPIHLSIYSPN
Sbjct: 121 ISSVPIHLSIYSPN 134


>29742.m001419 dynamin, putative
          Length = 609

 Score =  226 bits (576), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 108/134 (80%), Positives = 118/134 (88%), Gaps = 1/134 (0%)

Query: 1   MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFL 60
           MENLISLVNKIQRACTALGDHGE SALPTLWDSLP+IA            LES+VGKDFL
Sbjct: 1   MENLISLVNKIQRACTALGDHGEESALPTLWDSLPSIAVVGGQSSGKSSVLESIVGKDFL 60

Query: 61  PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTKQ 120
           PRG+GIVTRRPLVLQLH+ DEG +EYAEF+HLPRK+F+DFAAVRKEI DETDRETGR+KQ
Sbjct: 61  PRGAGIVTRRPLVLQLHRVDEG-KEYAEFMHLPRKKFSDFAAVRKEISDETDRETGRSKQ 119

Query: 121 ISSVPIHLSIYSPN 134
           IS+VPIHLSIYSPN
Sbjct: 120 ISTVPIHLSIYSPN 133


>29709.m001211 dynamin, putative
          Length = 618

 Score =  201 bits (511), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/135 (69%), Positives = 114/135 (84%), Gaps = 1/135 (0%)

Query: 1   MENLISLVNKIQRACTALGDHGEA-SALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDF 59
           ME+LI LVN+IQRACT LGD+G   ++  +LW++LP++A            LES+VG+DF
Sbjct: 4   MESLIGLVNRIQRACTVLGDYGGGDNSFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDF 63

Query: 60  LPRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTK 119
           LPRGSGIVTRRPLVLQLHK+D+GS+EYAEFLHLP++RFTDF+AVRKEIQDETDR TG++K
Sbjct: 64  LPRGSGIVTRRPLVLQLHKTDDGSQEYAEFLHLPKRRFTDFSAVRKEIQDETDRMTGKSK 123

Query: 120 QISSVPIHLSIYSPN 134
           QIS VPIHLSIYSPN
Sbjct: 124 QISPVPIHLSIYSPN 138


>29628.m000770 dynamin, putative
          Length = 614

 Score =  193 bits (491), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 93/135 (68%), Positives = 110/135 (81%), Gaps = 1/135 (0%)

Query: 1   MENLISLVNKIQRACTALGDHG-EASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDF 59
           ME+LI LVN+IQRACT LGD+G + ++LPTLW SLP++A            LES+VG+DF
Sbjct: 4   MESLIGLVNRIQRACTVLGDYGADTASLPTLWKSLPSVAVVGGQSSGKSSVLESIVGRDF 63

Query: 60  LPRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTK 119
           LPRGSGIVTRRPLVLQLHK+  G +EYAEFLHLP KR  DF+ VRKEIQDETD+ TG++K
Sbjct: 64  LPRGSGIVTRRPLVLQLHKTAIGIQEYAEFLHLPNKRIADFSLVRKEIQDETDKMTGKSK 123

Query: 120 QISSVPIHLSIYSPN 134
           QISSVPIHLSIYSP+
Sbjct: 124 QISSVPIHLSIYSPH 138


>27647.m000182 dynamin, putative
          Length = 622

 Score =  192 bits (487), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 2/134 (1%)

Query: 1   MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFL 60
           ME+LI LVN+IQRACT LGDHG      +LW++LP++A            LESVVG+DFL
Sbjct: 4   MESLIGLVNRIQRACTVLGDHGGEGM--SLWEALPSVAVVGGQSSGKSSVLESVVGRDFL 61

Query: 61  PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTKQ 120
           PRGSGIVTRRPLVLQLHK ++G  EYAEFLH P+KRF+DFA+VR+EI DETDR TG+TKQ
Sbjct: 62  PRGSGIVTRRPLVLQLHKIEDGKSEYAEFLHAPKKRFSDFASVRREIADETDRITGKTKQ 121

Query: 121 ISSVPIHLSIYSPN 134
           IS+VPIHLSIYSPN
Sbjct: 122 ISNVPIHLSIYSPN 135


>29506.m000169 dynamin, putative
          Length = 837

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 77/136 (56%), Gaps = 12/136 (8%)

Query: 3   NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFLPR 62
           ++I +VNK+Q     LG              LP +A            LES+VG+DFLPR
Sbjct: 26  SVIPIVNKLQDIFAQLGSQSTIE--------LPQVAVVGSQSSGKSSVLESLVGRDFLPR 77

Query: 63  GSGIVTRRPLVLQL----HKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRT 118
           G+ I TRRPLVLQL     K+D    E+ EFLHLP KRF DF+ +R+EIQ ET +E G  
Sbjct: 78  GNDICTRRPLVLQLLQTKRKADGSEEEWGEFLHLPGKRFFDFSDIRREIQAETAKEAGDN 137

Query: 119 KQISSVPIHLSIYSPN 134
           K +S   I L I+SPN
Sbjct: 138 KGVSDKQIRLKIFSPN 153


>29848.m004504 dynamin, putative
          Length = 797

 Score =  105 bits (262), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 79/136 (58%), Gaps = 11/136 (8%)

Query: 3   NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFLPR 62
           ++I +++K+Q   + + D  E + L     SLP +A            LE++VG+DFLPR
Sbjct: 21  SVIPIIHKLQDIISPISD--ELTKL-----SLPKVAVIGSQSSGKSSVLEALVGRDFLPR 73

Query: 63  GSGIVTRRPLVLQLHKS----DEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRT 118
           G  I TRRPLVL L  S    D+   E+ EF HLP KRF DF+ +R EIQ ET+RE G  
Sbjct: 74  GCDICTRRPLVLMLENSLKTPDDSIAEFGEFRHLPGKRFYDFSKIRDEIQAETEREAGNN 133

Query: 119 KQISSVPIHLSIYSPN 134
           K +S   I L IYSPN
Sbjct: 134 KGVSDKQIRLKIYSPN 149