Jatropha Genome Database

JcCB0034881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0034881.10 + phase: 1 /partial
         (208 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010846 UDP-glucose 4-epimerase, putative                       415   e-117
30190.m011159 UDP-glucose 4-epimerase, putative                       267   2e-72
29776.m000489 UDP-glucose 4-epimerase, putative                       147   4e-36
29724.m000863 UDP-glucose 4-epimerase, putative                       108   2e-24

>30190.m010846 UDP-glucose 4-epimerase, putative
          Length = 297

 Score =  415 bits (1066), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/218 (91%), Positives = 203/218 (93%), Gaps = 10/218 (4%)

Query: 1   TVYGWPKEVPCTEEFPLCAMNPYGRTKLFIEEICRDIYKSDSEWKIILLRYFNPVGAHPS 60
           TVYGWPKEVPCTEEFPL A NPYGRTKLFIEEICRDIY+SDSEWKIILLRYFNPVGAHPS
Sbjct: 80  TVYGWPKEVPCTEEFPLSAANPYGRTKLFIEEICRDIYRSDSEWKIILLRYFNPVGAHPS 139

Query: 61  GHIGEDPRGIPNNLMPYVQQVAVGRRPHLTVFGNDYSTKDGTGVRDYIHVIDLADGHIAA 120
           GHIGEDPRGIPNNLMPYVQQVAVGRRPHLTVFG DYSTKDGTGVRDYIHVIDLADGHIAA
Sbjct: 140 GHIGEDPRGIPNNLMPYVQQVAVGRRPHLTVFGTDYSTKDGTGVRDYIHVIDLADGHIAA 199

Query: 121 LRKLSDAKIGCEVYNLGTGKGTSVLEMVTAFEKASGKKIPLVMAGRRPGDAEIVYASTDK 180
           LRKLSDAKIGCEVYNLGTGKGTSVLEMVTAFEKASGKKIPLVMAGRRPGDAEIVYASTDK
Sbjct: 200 LRKLSDAKIGCEVYNLGTGKGTSVLEMVTAFEKASGKKIPLVMAGRRPGDAEIVYASTDK 259

Query: 181 AERELNWK----------DQWNWASKNPYGYGSPENSK 208
           AERELNWK          DQWNWASKNPYGYGS + +K
Sbjct: 260 AERELNWKAKFGIDEMCRDQWNWASKNPYGYGSADTAK 297


>30190.m011159 UDP-glucose 4-epimerase, putative
          Length = 218

 Score =  267 bits (683), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 132/188 (70%), Positives = 150/188 (79%), Gaps = 11/188 (5%)

Query: 25  RTKLFIEEICRDIYKSDSEWKIILLRYFNPVGAHPSGHIGEDPRGIPNNLMPYVQQVAVG 84
           R  LF+EEI RDI K++ EW+IILLRYFNPVGAH SG +GEDP+GIPNNLMPY+QQVAVG
Sbjct: 27  RLPLFLEEIARDIQKAEPEWQIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVG 86

Query: 85  RRPHLTVFGNDYSTKDGTGVRDYIHVIDLADGHIAALRKLSDAK-IGCEVYNLGTGKGTS 143
           R P L V+G+DY T+D T +RDYIHV+DLADGHIAALRKL  A+ IGC  YNLGTG+GTS
Sbjct: 87  RLPELNVYGHDYPTEDSTAIRDYIHVMDLADGHIAALRKLLTAENIGCIAYNLGTGRGTS 146

Query: 144 VLEMVTAFEKASGKKIPLVMAGRRPGDAEIVYASTDKAERELNWK----------DQWNW 193
           VL+MV AFEKA GKKIP  +  RR GDA  VYAST+KAEREL WK          DQWNW
Sbjct: 147 VLQMVAAFEKACGKKIPYKLCPRRAGDATAVYASTEKAERELGWKAKYGIEEMCRDQWNW 206

Query: 194 ASKNPYGY 201
           ASKNP+GY
Sbjct: 207 ASKNPWGY 214


>29776.m000489 UDP-glucose 4-epimerase, putative
          Length = 417

 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 118/223 (52%), Gaps = 31/223 (13%)

Query: 3   YGWPKEVPCTEEFPLCAMNPYGRTKLFIEEICRDIYKSDSEWKIILLRYFNPVGAHPSGH 62
           YG P+++P TE+     +NPYG+ K   E+I  D  K +S+  +++LRYFN +G+ P G 
Sbjct: 200 YGEPEKMPITEDTAQVPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVIGSDPEGR 258

Query: 63  IGEDPRGIPNNLMPYVQQ----------VAVGRRPHLTVFGNDYSTKDGTGVRDYIHVID 112
           +GE PR       P +++           A G    L V G DY T DGT +RDYI V D
Sbjct: 259 LGEAPR-------PELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTCIRDYIDVTD 311

Query: 113 LADGHIAALRKLSDAKIGCEVYNLGTGKGTSVLEMVTAFEKASGKKIPLVMAGRRPGDAE 172
           L D H+ AL K    K+G  +YN+GTGKG SV E V A +KA+G  I +    RRPGD  
Sbjct: 312 LVDAHVKALEKAMPGKVG--IYNVGTGKGRSVNEFVEACKKATGVDIKVDYLPRRPGDYA 369

Query: 173 IVYASTDKAERELNWKDQ-----------WNWASKNPYGYGSP 204
            VY+   K   ELNW  Q           W W   +  GYGSP
Sbjct: 370 EVYSDPTKIRVELNWTAQHTDLQESLQVAWRWQKAHRNGYGSP 412


>29724.m000863 UDP-glucose 4-epimerase, putative
          Length = 295

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 95/189 (50%), Gaps = 3/189 (1%)

Query: 1   TVYGWPKEVPCTEEFPLCAMNPYGRTKLFIEEICRDIYKSDSEWKIILLRYFNPVGAHPS 60
           T YG P+++P TEE     +NPYG+ K   E+I  D +K++    +IL   FN +G+ P 
Sbjct: 107 TTYGEPEKMPITEETHQKPINPYGKAKKMAEDIIIDFFKTNGMAFMILRYIFNVIGSDPE 166

Query: 61  GHIGEDPRGI---PNNLMPYVQQVAVGRRPHLTVFGNDYSTKDGTGVRDYIHVIDLADGH 117
            H+GE PR        +       A G  P L + G DY T DGT  RD I + DL + H
Sbjct: 167 EHLGESPRPALCEHGRISGACFDAARGIIPGLKIRGTDYKTADGTCERDRIDITDLVNAH 226

Query: 118 IAALRKLSDAKIGCEVYNLGTGKGTSVLEMVTAFEKASGKKIPLVMAGRRPGDAEIVYAS 177
           + AL     AK+  +     + +  SV E V A +KA+G  I +    R PGD   VY+ 
Sbjct: 227 MKALAHAKPAKLLLDHDTFLSSRCRSVKEFVEACKKATGVNIKVDYLSRWPGDYAEVYSD 286

Query: 178 TDKAERELN 186
             K  RELN
Sbjct: 287 PSKIRRELN 295