Jatropha Genome Database

JcCB0033761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0033761.10 + phase: 0 
         (225 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30106.m000644 conserved hypothetical protein                          238   2e-63

>30106.m000644 conserved hypothetical protein
          Length = 250

 Score =  238 bits (606), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/249 (58%), Positives = 158/249 (63%), Gaps = 28/249 (11%)

Query: 2   ENLASLEPFLFR-TFQDSWISEAYARDTETLTKALQKS---------------LFSDN-- 43
           ENLAS EPF FR TF DSWISEAYARDT+ LTKALQKS               L SD+  
Sbjct: 5   ENLASFEPFFFRHTFPDSWISEAYARDTDALTKALQKSLSNNNNNNNNSLLEVLTSDSLI 64

Query: 44  ----NLICSDTQHPP-TTPTASNVSGSDPET--VAPPKRQRNGIPATSGXXXXXXXXXXX 96
               NL  S++   P TTPTASNVSGS+PET    PPKRQRNGIPA +G           
Sbjct: 65  NPFLNLSNSESNASPITTPTASNVSGSEPETPSAPPPKRQRNGIPAATGKFSKRKSRASK 124

Query: 97  XXQTTFITADPANFRQMVQQVTGVRFGNAQLPPVPVLKPEPQRPGTRLHAAAGCLPTLDT 156
             QTTFI+ADPANFRQMVQQVTGVR  N+Q P VPVLKPEPQRPG+RL  A G LPTLDT
Sbjct: 125 RSQTTFISADPANFRQMVQQVTGVRLDNSQFPVVPVLKPEPQRPGSRLRGAPGGLPTLDT 184

Query: 157 SAFLLDHHQQPQMXXXXXXXXXXXXXXXXXXXXXXXXFPQPVVADGGPTAGLDYDTFSSF 216
           SAFLLDHH                             F Q V+ADGGP+AGL++DTFSSF
Sbjct: 185 SAFLLDHH---HHQQQQQMVGGATSSSGPIVGRDPVSFSQAVLADGGPSAGLEFDTFSSF 241

Query: 217 PTLESWKVM 225
           PTLES KVM
Sbjct: 242 PTLESGKVM 250