Jatropha Genome Database

JcCB0033401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0033401.10 - phase: 0 
         (753 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30018.m000545 conserved hypothetical protein                          510   e-144

>30018.m000545 conserved hypothetical protein
          Length = 636

 Score =  510 bits (1313), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 255/430 (59%), Positives = 314/430 (73%), Gaps = 6/430 (1%)

Query: 10  TRIYVGGLGESVTSDDLCTIFSKIGGDIKAVDIIRTKGRSFAYIDFSPSSHNSLSKLFST 69
            RI+VGGLGE+VT DDLC + SK+G   ++VDIIRTKGRSFAYIDF PSS ++L KLF+T
Sbjct: 14  VRIHVGGLGENVTRDDLCNLLSKVGIGFQSVDIIRTKGRSFAYIDFLPSSVSALPKLFNT 73

Query: 70  YNGCVWKGKRLRLEKAKEHYLDRLKQEWAEDAQLXXXXXXXXXXXXXXKNMESFKKPMKE 129
           YNGCVWKG RL+L+KAKEHYLDRLK+EWAEDAQL              K MES +K  K+
Sbjct: 74  YNGCVWKGGRLKLDKAKEHYLDRLKREWAEDAQLANSTCSDDVNNDADKQMESPRKTKKD 133

Query: 130 LSSEKKQLRIFFPRLQKLKSLPFSGTGKHRYSFRRVEVPPLPTHFCDCEEHSGSVYTTEK 189
           LS +KKQLR+FFPRLQKLKS+PFSGTGKH+YSFRRVEVP LP HFCDCEEHSGS++  + 
Sbjct: 134 LSLDKKQLRLFFPRLQKLKSIPFSGTGKHKYSFRRVEVPSLPLHFCDCEEHSGSLHAPKG 193

Query: 190 KAIPVLEEQGGGMSKEELDMMNSVMNKLFEIENVSATAHSDIVLTKEQESSIKVSDDFQS 249
           K IPVLEEQGGG+++EELD+M SVMN+LFEIENVS   HSD  LTKE++ +   +D+ Q 
Sbjct: 194 KQIPVLEEQGGGVNQEELDLMISVMNRLFEIENVSGAPHSDNELTKEEDYNTNATDNPQL 253

Query: 250 EENEGYSTEDDDNLIINVVQRRKETAFTDQESKLNKGQASKDGPTQDVLKSQTRRHDDGN 309
           +E+EGYST D+D+LIINVV RRKETAF++QESKLNK QAS+D P Q+VL+ +TR   + +
Sbjct: 254 DESEGYSTADEDDLIINVVSRRKETAFSNQESKLNKRQASEDRPAQEVLRKRTRNDKEND 313

Query: 310 RKGSVSAVSEGNGSFQSNLNEPGNILEAKLIEPESIAKQSDPKLSWSQKSSWRELIGNKS 369
               VS  S+G GS Q+  N PG +   +LIE +SI KQS P +SWSQKSSWREL+GN++
Sbjct: 314 TNNYVSVASQGKGSLQAPSNGPGMLSGDQLIESQSIVKQSAPGVSWSQKSSWRELVGNRN 373

Query: 370 SSAMNISDILPGIXXXXXXXXXXXXXXXXXXXXXXXXXRRENQKGQTNKPEVLDKIEVEV 429
           ++A++ISDILPGI                         + ENQ+GQ      LDK EVE 
Sbjct: 374 NNAISISDILPGISANKEEETKSAATLNSNKGKNKELLKHENQRGQ------LDKAEVEG 427

Query: 430 PAETKPAKQD 439
            AE +  K D
Sbjct: 428 LAEAQDTKMD 437



 Score =  182 bits (461), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/234 (47%), Positives = 133/234 (56%), Gaps = 36/234 (15%)

Query: 542 LLRHENQRGQTENQGVLDKIELEGPAETQPTKQDSASNETGRGSAWLNKASWTQLVAXXX 601
           LL+HENQRGQ      LDK E+EG AE Q TK D AS++ GRGSAWL+KASWTQLV    
Sbjct: 410 LLKHENQRGQ------LDKAEVEGLAEAQDTKMDFASDKAGRGSAWLHKASWTQLVNSSN 463

Query: 602 XXXXXIAQILPGLNFEKQEPVKPDGVIIADSTSCKHSDITEKRKSHTAVDGEMALGFERD 661
                I QILPG+ F+K EP K DG IIADS   KH D  E  K+   +DG       RD
Sbjct: 464 SNSFSITQILPGVTFDKHEPAKSDGDIIADSRGFKHGDTVETGKNELTIDGTRDFRVGRD 523

Query: 662 RDVKSTPELSQHMVVGNNDVPAPTDGKYGSATKQ-----------------------AAP 698
              K TPE S+ +V+GNN+  APT  +    T++                        +P
Sbjct: 524 GVAKETPESSRLIVIGNNNTSAPTKDRSYPVTEEKGSGVVAIDETHLYMRTEESNTNTSP 583

Query: 699 PTENIYRSAKKQFDLRTNVGGVL-IGESCSFMRTDASLKEWENIKAALSGSRKR 751
           PTE    SA K+       GGV+ IGE+  FMRT+ S+KEW NI+AALSGSRKR
Sbjct: 584 PTEIKNNSATKE------KGGVVTIGETRPFMRTEESVKEWANIRAALSGSRKR 631